LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3837g00074	ATGGTATGGAATATATATATATTTTTTAAAAAAGAGTTGACCATGTCGCTAAAGAGGCGCCCCGATGATGGCAAGACTCCTGATGATAAGCGTAGAAAGCCTCCTCCTTTCTCCAGTGTGGTGCGCGAGGTGATGAAGTTACAATCTGTCAGGAATTTGCTGGAGCCAATTTTAGAGCCCTTGGTTCGTCGAGTGGTTAAGGAGGAAATCGAAGTGGCCCTAAGGAAGCATTTAACCAGCATAAAACAGACCTGTGGAAAGGAGATGCTCACTACTGAGTCAAGAAGTTTGCAGCTGCAGTTTGATAACAACATTTCTCTTCCTGTCTTTACTGGGGCTCGAATTGAAGGAGAGGATGGCTCCAACTTAAGGATAAGTTTAGTTGATGCCCAAACAGCGAAGATTGTTACTACAGGATCTGAATCTTTAGCTAAGGTAGAAATTGTAGTCCTCGAGGGTGATTTTGAAGAAGAAAGTGACATTTGGACACCTGACGAGTTCAGGAGCAATATTGTGAGAGAGAGGGAAGGAAAAAAGCCCCTCCTTACAGGAGATGTAATTTTATATCTTAAAGATGGGATTGGTATGGTGAGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCAGGCTTGGGGCAAGAGTTGTGGACAACTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACCGAGGAGAATTGTACAAGAAACACCACCCTCCTAGTCTGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGAAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCTTTAATGTTAAAGATCTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAATATATTGGGTACTGGGATGTCAACAAAGATGTGGGAAATAACTGTGGAGCATGCTCGAACTTGCACACTTGACACGGCGAGGTTAGTGTACTTCCCTTCTCATTCTCAACAGAAATCTGGTGTGGTCGTCAATGCTGTGGGACAAGTGACAGGGCTACTCTCTGAATGCGAGTATGTCCCAGTAGATAAGATGTCTGAAACTGAAAAGGCTGATGCTCAAAACTTGGTTATTTCTGCATATAACCAAGGGGAGACTTTTACCTTTTGTGATGATGAAGGCTCTCTGATGAATGGATCTTCAAAGTTGACTAATGTACTTTACTCCCCAAGTTCTCCGAGGACCGAGGGATCAAGCGCCAACAAGCTTTTGGCTCCTCAAAAGAGTGGGGGATTCAATTACACACAAGCAAGTGCCTCTTCTCCAGATATCATGTCATCCATATATTCTGTTGGAACTAGTGGCTTAGATGACTATTGCTTGCCTAATTTTGACAGCATGGGCCTTAGATATGATCATACTCTTAGTTTTCCAGCCCAAGTCTCCAACTCTTTGATCTGTGACACGGATCCAATGGCCCATGTTTTTAGTGATGAAGATCATCTGCAATTTTTTGATACTGATCTTCAATCTCAGTGCCACATTGAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGCGGGCACATTCTACACCCATGGTCAATTGTAAAGCTAAGAGGAGATGGAGAAAGTTATTCAACGTTCTAAAATGGTTCATGGTGAGCAAACGAGGACCCCAAAGATACAGGTAA	1689	0.4281	MVWNIYIFFKKELTMSLKRRPDDGKTPDDKRRKPPPFSSVVREVMKLQSVRNLLEPILEPLVRRVVKEEIEVALRKHLTSIKQTCGKEMLTTESRSLQLQFDNNISLPVFTGARIEGEDGSNLRISLVDAQTAKIVTTGSESLAKVEIVVLEGDFEEESDIWTPDEFRSNIVREREGKKPLLTGDVILYLKDGIGMVSEISYTDNSSWTRSRRFRLGARVVDNFDGIRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIFNVKDLLTLLNLDPAKLRNILGTGMSTKMWEITVEHARTCTLDTARLVYFPSHSQQKSGVVVNAVGQVTGLLSECEYVPVDKMSETEKADAQNLVISAYNQGETFTFCDDEGSLMNGSSKLTNVLYSPSSPRTEGSSANKLLAPQKSGGFNYTQASASSPDIMSSIYSVGTSGLDDYCLPNFDSMGLRYDHTLSFPAQVSNSLICDTDPMAHVFSDEDHLQFFDTDLQSQCHIEADLQSAVDSFMRAHSTPMVNCKAKRRWRKLFNVLKWFMVSKRGPQRYR	562

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3837g00074	562	Pfam	Calmodulin binding protein C-terminal domain	329	383	IPR046829	-
	Gabi3837g00074	562	PANTHER	OS02G0177800 PROTEIN	30	454	IPR012416	GO:0005516
	Gabi3837g00074	562	Pfam	Calmodulin binding protein central domain	254	320	IPR046830	-
	Gabi3837g00074	562	Pfam	Calmodulin binding protein-like N-terminal domain	97	242	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi3837g00074	Gabi-Chr3837	623848	638115	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3837g00074	15	379	Calmodulin-binding Proteins	AT5G62570	59.838	9.98e-156	449

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3837g00074	-		-	gmx:100793156	867.07