Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3837g00049 ATGGTGGCAAGATCATGCATGAATTTGTTGAACTTGGTGTCAGGGGACATTTATAATTTCCCTCAATCTCCCAGAGCTCTTCCCCGAGTTATGACTGTTCCAGGAATTATGTCTGATGTAGATGGCAAATGCAGGGACAATGATGATTCAAATGCTTTCTCGTCAGAATACAATCGCAAGATAATTATAGTAGCAAATTTTCTTCCTCTCAATGCTCAGAAGGACAAAATATCTGGCAAATGGTGCTTTAGTTATGACGAAGATTCAATTTTGTTGCAATTAAAGGATGGTCTCCCTTTAGACACTGGTGTTGTTTATGTCGGATCGCTGAAGGTTGATGTTGATGCTACTGAACAAGATAAAGTTTCTGTCGAGTTGCTGGAGGAATTCAATTGCTTGCCTACCTTTATTCCTTCAGACCTCCAAAAACAATTTTATAATGGATTCTGCAAGCAACATTTGTGGCCTCTATTCCATTACATGCTGCCCATGTATCCACATTACTGTAATCGCTTTGATAGGTCACTGTGGCAGGCTTATGTTTCTGCTAACAAGAGATTTGCAGACAAAGTCTTGGAAGTCATTAATCCAGAATATGATTACGTATGGGTTCATGATTATCATCTTATGGTTCTTGCAACATTTTTGCGGAAGAAGTATTGTCGTGTCAAGCTAGGATTTTTCCTCCACAGTCCATTTCCTTCATCGGAAATATTTCGCGCTCTGCCTGTTAGGGATGAAATATTGAAAGCACTTGAATACTTTGGCCGTGTAATATTCATCAAAATTTTGCCCGTTGGGATTCATATGGGTCGACTTCAATCTGCCTTAGATCACCCTTCTACTTTAGCCAAAGTCAGAGAAATCAGTGAGAAATTTAAGGGGAAAAAACTTATTCTTGGTGTTGATGATATGGATGTTTTTAAAGGTATCGGCCTAAAGTTCTTGGCCATAGAACAACTCCTTCAACAATATCCAGAATTGCAGGGTGAATTAATACTGATCCAAATTGTAAATCCACCTAGGAGCACTGGCAATGATATTGAGGAAGAAAAGAAGGAGATATACATTACTGCCAAAAGGATAAATGAAAGGTTTAGTTTGCCAGGTTATGAACCTGTCATCATCATTGATCAACCTATTTCTTTATATGAGAAGACATCATACTATGCTTTGGCAGAATGTTGCATTGTGAATGCGGTGCGGGATGGTATGAATTTGGTTCCTTACAAATACGTTGTCTGCAGGCATGGGAGTCCTAAAATGGATGAAGCTTTAGAAATTGCTTCTGAATCCCCTCGTACAAGTGCACTTGTTGTTTCTGAGTTTATAGGTTGCACTCCATCTCTTAGTGGGGCAATCAGGGTAAACCCATGGGACATTAATGCTGTGGCTGATGCACTGAATTTGGCCATCACAATACCTAGTGGAGAGAAACAACTGCGTCATGAGAATCACTATCGATATGTTAGCTCTCATGATGTAGCTTACTGGGTCCGATGTTTTATGAAAGATCTAGAGCACTCGTGCAGGGATCACTATAATAAAAATTGCTGGGGCTTTGGCTTTGGCCTGAGTTTCAGAATTTTATCTCTTTCTCCTAGTTTCAGTAAGTTGTCTATAGACCACATTGTCTCTGCATATAGAAGGAAAAATTGCAGGGCACTGTTTTTGGATTATGATGGTACAATCATACCTCAAACATCCATTGTTAAAACCCCTGGTCCTGAAGTCATAACTGTTCTGAATAACCTTTGCAATGACCCTAACAACATTGTGTTTATAGTAAGTGGCAGGGGGAAAACCACACTGAGTGAATGGTTCGATCAGATTGAGAATCTTGGTATAGCAGCTGAGCATGGTTATTTTCTAAGGTGGGGTCAACAATCAACTTGGGAAATAAGTCATCCAAGTACAACTTGGGAAATAAGTCATCCAAGTACTAATTTTTCTTGGAAAAGGATTGTTGAACCTGTAATGAGATTGTATACTGAGGCAACGGATGGCTCCTATATAGAGACCAAAGAGAGTGCCTTGGTATGGCACTACTATGATGCTGATCCTGATTTTGGATCTTGGCAAGCCAAGCAGCTGTTTGATCACCTTGAAAGTTTATTTGCAAATGAACCTGTAGTTGTTAAGAAGGGAAAGCATATTATAGAAGTCAAGTCACAGGGAATCACTAAAGGGTTAGTTGCAGAGGAAGTTCTGTCTACAATGGCCAGGGACGGGAAATTGCCAGATTTTGTATTGTGCATAGGGGATGATAGATCTGATGAGGATATGTTTGAGAGCTTATTAACCAAAGCTTATAGTGGAACCTCTTCTCCTGCACCAGAAATCTATGCATGCACTGTTGGTCAGAAACCAAGTAAAGCTAGGTACTACTTAGATGATGTTGTGGATGTGATGAGGTTGCTTCAAGCTCTTGGTACCGTTTCAGTGCCTTAA 2451 0.3994 MVARSCMNLLNLVSGDIYNFPQSPRALPRVMTVPGIMSDVDGKCRDNDDSNAFSSEYNRKIIIVANFLPLNAQKDKISGKWCFSYDEDSILLQLKDGLPLDTGVVYVGSLKVDVDATEQDKVSVELLEEFNCLPTFIPSDLQKQFYNGFCKQHLWPLFHYMLPMYPHYCNRFDRSLWQAYVSANKRFADKVLEVINPEYDYVWVHDYHLMVLATFLRKKYCRVKLGFFLHSPFPSSEIFRALPVRDEILKALEYFGRVIFIKILPVGIHMGRLQSALDHPSTLAKVREISEKFKGKKLILGVDDMDVFKGIGLKFLAIEQLLQQYPELQGELILIQIVNPPRSTGNDIEEEKKEIYITAKRINERFSLPGYEPVIIIDQPISLYEKTSYYALAECCIVNAVRDGMNLVPYKYVVCRHGSPKMDEALEIASESPRTSALVVSEFIGCTPSLSGAIRVNPWDINAVADALNLAITIPSGEKQLRHENHYRYVSSHDVAYWVRCFMKDLEHSCRDHYNKNCWGFGFGLSFRILSLSPSFSKLSIDHIVSAYRRKNCRALFLDYDGTIIPQTSIVKTPGPEVITVLNNLCNDPNNIVFIVSGRGKTTLSEWFDQIENLGIAAEHGYFLRWGQQSTWEISHPSTTWEISHPSTNFSWKRIVEPVMRLYTEATDGSYIETKESALVWHYYDADPDFGSWQAKQLFDHLESLFANEPVVVKKGKHIIEVKSQGITKGLVAEEVLSTMARDGKLPDFVLCIGDDRSDEDMFESLLTKAYSGTSSPAPEIYACTVGQKPSKARYYLDDVVDVMRLLQALGTVSVP 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3837g00049 816 NCBIfam trehalose-phosphatase 554 810 IPR003337 GO:0003824|GO:0005992
Gabi3837g00049 816 CDD HAD_TPP 555 805 - -
Gabi3837g00049 816 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 553 679 - -
Gabi3837g00049 816 Pfam Glycosyltransferase family 20 252 507 IPR001830 GO:0003824|GO:0005992
Gabi3837g00049 816 SUPERFAMILY HAD-like 554 811 IPR036412 -
Gabi3837g00049 816 Gene3D Glycogen Phosphorylase B; 271 491 - -
Gabi3837g00049 816 FunFam Alpha,alpha-trehalose-phosphate synthase 276 491 - -
Gabi3837g00049 816 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 252 810 IPR001830 GO:0003824|GO:0005992
Gabi3837g00049 816 FunFam Trehalose-6-phosphate synthase 8 55 253 - -
Gabi3837g00049 816 FunFam Trehalose-6-phosphate synthase 10 693 816 - -
Gabi3837g00049 816 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 510 - -
Gabi3837g00049 816 CDD GT20_TPS 60 507 IPR001830 GO:0003824|GO:0005992
Gabi3837g00049 816 Gene3D - 693 815 IPR023214 -
Gabi3837g00049 816 Gene3D - 553 645 IPR023214 -
Gabi3837g00049 816 NCBIfam HAD-IIB family hydrolase 556 765 IPR006379 -
Gabi3837g00049 816 FunFam Trehalose-6-phosphate synthase 2 646 725 - -
Gabi3837g00049 816 Pfam Trehalose-phosphatase 557 799 IPR003337 GO:0003824|GO:0005992
Gabi3837g00049 816 Gene3D Glycogen Phosphorylase B; 47 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3837g00049 Gabi-Chr3837 428730 434401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3837g00049 1 814 Trehalose Biosynthesis Gene Families AT1G23870 61.620 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3837g00049 K16055 - gmx:100808800 1316.6