Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3837g00042 ATGGACATTGTAAGTTGTACACTGCTCCTTCTGTTAACGTGCATAGCCATTCATGTTCTTCGCTCATTCCTTGCAAGAAGCACGAAACCAAACTACAAGCTTCCACCAGGACCTTCCCCTCTTCCCATTATTGGAAACCTCCTTGAACTTGGGGAAAAGCCCCACAAGACCATGGCTAAGCTAGCTAAGATTCATGGCCCTGTTATGAGTCTAAAGCTAGGTCAAATAACCACCGTTGTGATCTCCTCAGCAGAAATGGCCAAAGAGGTGCTTCTAACCAATGACCAGTTCTTGTCAAACCGAACCATTCCCCAATCTGTGTCAGTTCTCAACCACCAACACTATAGCCTTGCCTTCATACCCATTTCACCTCTTTGGCGAGAGTTGAGAAAAATATGCAACACTCAATTATTTGCACACAAGACTCTTGATGAAAGCCAACACGTTAGGCTTAATAAAGTGCAACAACTCCTCATGGATATCCATCAAAGCAGCCAAATTGGTGAAGCAGTAGATATTGGAACAGCAGTGTTCAAGACTACCATAAATCTATTATCAAACACCATTTTCTCTGAGGATTTGATTCAGTCTACAGGTAAAGCAGGAGAGTTCAAGGACTTGGTGACGAATATCACAAAACTTGTCGGAACACCAAACTTGGCAGATTATTTTCCCGTGTTAAAGATGGTTGATCCACAGGGCGTAAAAAGAAGACAGGCTAAGAACGTTAGGAAGGTGTTAGACATCTTTGATGGCTTGGTTAAGCAGAGGTTGAAGGTGAGGGAAGAAGGCACAGGTTTAGAAACCCACAAAGACATGTTAGATGCCATGCTCAACATTTCTAAAGAGAACAAGATGATGGACAAAAATATGATTGAACATCTCTCACATGATCTATTTGTTGCGGGAACAGATACAACAGCATCTACCTTAGAATGGGCAATGACTGAGCTACTCCGCAACCCAGAGGTAATGTCAAAAGCGAAAAAAGAGCTTGAGAAAATCATTGGCAGAGGTAGAGGTATCCCACTTGAGGAATCAGATGTTTCTAAGCTTCCATACTTACAAGCAATAATAAAAGAGACATTAAGGTTGCACCCACCAGTTCCATTTTTACTACCACGTAAAGCAGAGAGAGATGTGAACATAGGTGGCTACACTATCCCAAAAGATGCACAAGTGCTAGTTAATGTGTGGACTATATGCAGGGATCCTACCTTATGGGAGAACCCAACTTTGTTTTCGCCAGAGAGGTTCATGGGATCAGATATTGATGTCAAAGGACGAAACTTTGAGCTAGCACCGTTTGGTGCTGGACGACGAATATGTCCTGGCTTGCAATTGGCTAATAGAATGTTGCTCTTGATGTTGGGTTCTCTAATCAACTCATTTGATTGGAAGCTTGAAGATGGCTTGAAACCGGAAGACATTGACATGGATGATAAATTTGGTATTACCTTGCAAAAGGCTCAGCCACTTCGAATTGTTCCTATCCAAATCAGCAATTAA 1509 0.4221 MDIVSCTLLLLLTCIAIHVLRSFLARSTKPNYKLPPGPSPLPIIGNLLELGEKPHKTMAKLAKIHGPVMSLKLGQITTVVISSAEMAKEVLLTNDQFLSNRTIPQSVSVLNHQHYSLAFIPISPLWRELRKICNTQLFAHKTLDESQHVRLNKVQQLLMDIHQSSQIGEAVDIGTAVFKTTINLLSNTIFSEDLIQSTGKAGEFKDLVTNITKLVGTPNLADYFPVLKMVDPQGVKRRQAKNVRKVLDIFDGLVKQRLKVREEGTGLETHKDMLDAMLNISKENKMMDKNMIEHLSHDLFVAGTDTTASTLEWAMTELLRNPEVMSKAKKELEKIIGRGRGIPLEESDVSKLPYLQAIIKETLRLHPPVPFLLPRKAERDVNIGGYTIPKDAQVLVNVWTICRDPTLWENPTLFSPERFMGSDIDVKGRNFELAPFGAGRRICPGLQLANRMLLLMLGSLINSFDWKLEDGLKPEDIDMDDKFGITLQKAQPLRIVPIQISN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3837g00042 502 Gene3D Cytochrome P450 24 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 SUPERFAMILY Cytochrome P450 35 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3837g00042 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Gabi3837g00042 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 499 - -
Gabi3837g00042 502 FunFam Cytochrome P450 76C4 26 496 - -
Gabi3837g00042 502 CDD CYP76-like 62 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3837g00042 Gabi-Chr3837 361200 362827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3837g00042 1 499 Cytochrome P450 AT2G45550 46.850 8.95e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3837g00042 - - gmx:100807367 796.193