Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3837g00031 ATGGCTCCAGAAGTGTACGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATCTTGGAGATGGTCACCTTTGAATATCCTTACAGTGAATGTAACCATCCTGCTCAAATTTACAAAAAAGTTGTCTCTGGGAAGAAGCCAGAAGCTCTTTACAAAGTAAATGATCCTGAGGTTAGGCAGTTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCTAAGGAACTCTTGAAGGACCCTTTTCTCCAAATTGATGATTATGGATCTGACTTGAAAGCAGTTCAGTATCAAAGAGATTGCTATGAAGTAACCCCAATAATTAGACAACCTCTGAATGGAATTCATAGCATTAACAACGCCTTCATGAGTGGGTACACTGATAATCTTGGTGGTTATGGACTTATATCTGAATTGGATTATCATCAAGAAGATTTTGAAACGAGTGAGATTGATCTCTTTGATTGTGAAGAGGATGATGATTTGGCTGAAGTTGACACCACAATTAAAGGAAGGAGAAGAGAAGATGATGGCATCTTTCTAAGAATCAGACTAGCAGATAAGGAAGGTCGAGTTCGAAACATCTACTTCTCGTTTGACACTGAGACTGATACTGCATTGAATGTTGCAAATGAAATGGTAGTTGAGCTTGATATGACTGACCAAGATGTAACAAAATTAGCAAATATGATAGATAATGAAATTTTAACCTTGGTTCCAGAGTGGCAAATGGGACCCAGAATAGAGGAAATTTCAGAATGTTCAAGTGCAAGTTTCTGCCACAATTGTGCTGCAAACGGTTCCATATTTGATTATGTATCACCAATTAATCCATGTGCCAAGAATCTGCAATTTCTTCATTGTTCTAAAAGCGGATGTGCTGCAGTTCATGGTCGATTTGAGGAGATTACATACCAAGTTGAAGGGTCTGCAAATAGTGCTACAGAAGGTACACCAGCTGAATCAAGCAAATCCACTGGCATTCATTATACCGATATATGGGCTCAGAGAGATGAACCGGAGTTATGTCCTGAAGGGTCAAAAGACATACATTGTGACCAAGCTCATGTTGCATCTAGCCTATCAACCATCAAGGATGATGGAAGCACCAATAATGTTGATGATCAAAGTGGTCTCAATACTAGAAAGTCTCCTTCTAGGACTGTATCAGATTGTGTTCTCTTGGACTACGAGAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAATACCAAATGCAGTTAAGAGAGCTTAGAGACCATCAACTAGGGGGTAAACCAAAATTTACTTGCTTATCTCCTGACTCTAAAAAATTAGATCATGGGAAAGATGGAGTTCTGAGGCTATCAGTTACACCCCATTTGAAGAAACAGCACAACAAACCACTATTGAGATATATAGCTTCTGGGAAGCATTTTCCTGTTGATGCTGAGAAATGCACCACTTTGGCTGATCAAATGATTCAAAATGTTGATGAGACGGGTCAGTCTAACAGTCCTGAGCATATGGTCACAGCCAAAGATTTCTTTACACGAGCTTTGCTTCCACAGTCGCTTCACAGGGCAACCTCGCTTCCTGTTGATGCTGTAGATGTCTAG 1620 0.3969 MAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVNDPEVRQFVEKCLATVSLRLSAKELLKDPFLQIDDYGSDLKAVQYQRDCYEVTPIIRQPLNGIHSINNAFMSGYTDNLGGYGLISELDYHQEDFETSEIDLFDCEEDDDLAEVDTTIKGRRREDDGIFLRIRLADKEGRVRNIYFSFDTETDTALNVANEMVVELDMTDQDVTKLANMIDNEILTLVPEWQMGPRIEEISECSSASFCHNCAANGSIFDYVSPINPCAKNLQFLHCSKSGCAAVHGRFEEITYQVEGSANSATEGTPAESSKSTGIHYTDIWAQRDEPELCPEGSKDIHCDQAHVASSLSTIKDDGSTNNVDDQSGLNTRKSPSRTVSDCVLLDYENEIRQELRWLKAKYQMQLRELRDHQLGGKPKFTCLSPDSKKLDHGKDGVLRLSVTPHLKKQHNKPLLRYIASGKHFPVDAEKCTTLADQMIQNVDETGQSNSPEHMVTAKDFFTRALLPQSLHRATSLPVDAVDV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3837g00031 539 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Gabi3837g00031 539 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 431 - -
Gabi3837g00031 539 SUPERFAMILY Protein kinase-like (PK-like) 1 90 IPR011009 -
Gabi3837g00031 539 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3837g00031 539 Gene3D - 184 265 - -
Gabi3837g00031 539 MobiDBLite consensus disorder prediction 369 392 - -
Gabi3837g00031 539 Pfam Protein kinase domain 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3837g00031 Gabi-Chr3837 281115 283870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3837g00031 1 538 MAP Kinase Kinase Kinase AT3G04910 41.065 1.49e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3837g00031 Pkinase 7.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3837g00031 K08867 - gmx:100804179 874.774