Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3835g00049 ATGGATTTTTGGCCAGAATTTCTTGCGAGCAGTTCGGGTAGAGAGTTTGTAGCAGGAGGCTTTGGAGGCACTGCTGGTATAATCTCTGGATACCCATTGGACACACTACGCATCCTGCAACAGAGCTCTAAAACTGGCTCTGCCTCCACAATCCTCAGAAATGTGGTGGCCAAGGAAGGACCATCTGCTCTCTACCGGGGCATGGGTGCTCCTTTGGCCTCTGTTACCTTTCAGAACGCCATGGTTTTCCAAATTTATGCAGTTCTTTCAAGGGCATTTAGCACCCCGTCCGTTTCTGCTAGTGACCCTCCTTCCTTAAAGGGTGTTGCTTTAGGAGGAATTTGTACCGGTGCTGTGCAAAGTACATTGCTATCCCCTGTTGAGTTGATTAAAATTCGCCTTCAGCTGCAGAACACAGGTCAATTGACAGATACCCAAAAAGGTCCTGTAATGATCGCTAAGAACATATGGAAAATGGAGGGCATTCGTGGCATTTATCGAGGATTTGGCATCACTATGCTCAGAGATGCACCTGCACATGGCTTCTACTTTTGGACATATGAATACACGAGGGAAATACTTCACCCAGGTTGTAGAAAAAGTTGTCAAGAAAGCTTGAATACTATGTTAATAGCAGGAGGATTAGCTGGGGTTGTGAGTTGGGTTTTTAGCTACCCTTTAGACGTTATAAAGACAAGATTGCAGGCTCAGACACCTTCTTCATTGAAATACAAAGGCATTTTGGATTGCCTAAGAAAGAGCATTAAACAAGAAGGATACGTTGTGCTGTGGCGGGGTTTAGGAACTGCATTAGCTAGAGCATTTGTGGTGAATGGTGCTGTTTTTTCTTCTTATGAGATCACTCTAAGGTATCTGTTTAACAACTGA 888 0.4448 MDFWPEFLASSSGREFVAGGFGGTAGIISGYPLDTLRILQQSSKTGSASTILRNVVAKEGPSALYRGMGAPLASVTFQNAMVFQIYAVLSRAFSTPSVSASDPPSLKGVALGGICTGAVQSTLLSPVELIKIRLQLQNTGQLTDTQKGPVMIAKNIWKMEGIRGIYRGFGITMLRDAPAHGFYFWTYEYTREILHPGCRKSCQESLNTMLIAGGLAGVVSWVFSYPLDVIKTRLQAQTPSSLKYKGILDCLRKSIKQEGYVVLWRGLGTALARAFVVNGAVFSSYEITLRYLFNN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3835g00049 295 FunFam Mitochondrial arginine transporter BAC2 11 295 - -
Gabi3835g00049 295 SUPERFAMILY Mitochondrial carrier 14 286 IPR023395 -
Gabi3835g00049 295 PRINTS Mitochondrial carrier protein signature 213 235 IPR002067 GO:0055085
Gabi3835g00049 295 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Gabi3835g00049 295 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Gabi3835g00049 295 PRINTS Mitochondrial carrier protein signature 166 184 IPR002067 GO:0055085
Gabi3835g00049 295 Gene3D Mitochondrial carrier domain 10 295 IPR023395 -
Gabi3835g00049 295 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 292 - -
Gabi3835g00049 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Gabi3835g00049 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 193 IPR018108 -
Gabi3835g00049 295 Pfam Mitochondrial carrier protein 111 194 IPR018108 -
Gabi3835g00049 295 Pfam Mitochondrial carrier protein 209 294 IPR018108 -
Gabi3835g00049 295 Pfam Mitochondrial carrier protein 12 94 IPR018108 -
Gabi3835g00049 295 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 291 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3835g00049 Gabi-Chr3835 489809 492344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3835g00049 16 99 Antiporters AT1G79900 32.558 7.12e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3835g00049 K15109 - gmx:100801221 498.434