Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3835g00034 ATGAGCGTGGTCGGTTTTGATTTTGGTAACGAGAGCTGCATTGTTGCCGTTGCAAGGCAGAGGGGGATTGATGTTGTTCTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTGTGCTTTGGTGACAAACAACGGTTCATTGGAACAGCTGGAGCTGCATCTACTATGATGAACCCAAAGAATTCAATATCGCAGATAAAGCGGTTAATTGGTAAACAATTTGCCGATCCAGAATTGCAGCGGGATCTGAAGTCATTGCCTTTTGTTGTCACTGAAGGGCCTGATGGATATCCTTTAATTCATGCACGGTACCTTGGTGAAGCTAAAACATTTACACCGACCCAAGTCCTCGGAATGATGTTTTCAAATCTTAAAGAAATAGCCCAGAAGAATCTGAATGCAGCTGTTGTTGATTGCTGCATTGGAATTCCTGTTTATTTTACTGATATTCAGAGGAGGGCAGTCGTGGATGCAGCCACTATTGCTGGTTTGCACCCACTTCGCCTGTTTCATGAAACAACAGCAACTGCCTTGGCTTATGGAATTTATAAGACTGATCTTCCTGAGAATGATCAGCTGAATGTTGCCTTTGTTGACATTGGACATGCTAGCATGCAAGTGTGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCATCAATATGATAGGTCTTTGGGTGGTAGGGATTTTGATGAGGTTCTATTCCATCATTTTGCTGCAAAATTTAAGGAGGAGTACAAGATCGATGTTTTCCAGAACGCTAGGGCCTGTCTAAGGCTGAGGGCTGCTTGCGAAAAGCTGAAGAAGATGCTTAGTGCGAATCCAGAGGCACCTCTGAACATTGAGTGCTTAATGGATGAGAAGGATGTGAGGGGATTTATCAAGCGTGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAGCGTGTGAAGGGACCTTTGGAGAAGGCTCTTGCAGAAGCAGGTCTTACAATTGAGAATGTACACATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCAGCTATAAACAAAATATTGACAGAGTTTTTCAAAAAAGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGTTGTGCGTTGCAGTGTGCAATTCTCAGTCCGACTTTTAAAGTACGAGAGTTTCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCTCTTTCGTGGAAAGGTTCTGGTCCAGATGCACAGGATAGTGGACCTGATAATAAGCTAAGTACCATTGTTTTCCCTAAGGGCAATCCCATTCCAAGTGTCAAGGCATTGACATTTTACAGGTCAGGAACCTTTTCTGTTGATGTGCAATATGATGATGTGAGTGATTTGCAAACACCTGTAAAGATCAGCACATATACCATTGGCCCCTTCCAATCTACCAAAAGCGAGAAGGCAAAAGTTAGAGTGAAAGTTCGTCTAGATCTGCATGGAATTGTATCTGTTGTGTCAGCAATTCTCCTGGAAGAGGAAGAAATTGAGGTTCCAGTTTCCAAGGAATCAGCGGGAGAAAGTGCTAAGATGGAAACTGATGAAGCTCCTGCTGAAGCTGCTGCACCTCCTAGCTCCAATGACAATGATGTTAATATGCAAGATGCTAAGGCAACTGCTGAAGCCCCTGGGGCCGAAAATGGCATCCCCGAGACAGGAGATAAGCCTATGCAAATGGATACTGATACCCAGGTTGAGGCTTCAAAGAAAAAAGTGAAGAAAACAGACATTCCAGTGGCAGAGGTAATTTATGGAGCGATGGCACCTCTGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTATATGACATGAGAAACAAGCTTAATAACAAATATCAAGAATTTGTCATTGCTTCAGACAGGGAAAATCTTACTGCTAAGCTTCAGGAGGTGGAAGACTGGTTATATGAGGAGGGTGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTAGAGGAGCTCAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAAGATTACATGGAGAGGGGTACAATAATTGATCAACTCATCTATTGCGTAAATAGTTACAGAGAAGCTGCGATGTCAAATGATCCCAAGTTTGATCACATTGACATCAACGAGAAACAGAAGGTCTTAAATGAATGTGTGGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAACAGGACTCGCTTCCAAAATATGCCACCCCTGTACTCTTGTCAACTGAAATAAGAAAGAAAGCCGAGGCTGTTGATAGGTTCTGTAAGCCGATTATGATGAAACCAAGGCCAGCCAAGCCAGCTACTCCAGAAGCACCAGCAACCCCGCCACCTCAGGGTGGTGAGCAGCAGCAACCTCAGGAGAATACTGATGCTAACACCAATGAGAATGCAGGGGACAGTGGTAATCAGGTCCCACCACCCTCTACTGAACCAATGGAGACTGACAAGTCAGAGAATGCAGGCTCTGCCTAA 2559 0.44 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKQFADPELQRDLKSLPFVVTEGPDGYPLIHARYLGEAKTFTPTQVLGMMFSNLKEIAQKNLNAAVVDCCIGIPVYFTDIQRRAVVDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLSHQYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNARACLRLRAACEKLKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTIENVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQDSGPDNKLSTIVFPKGNPIPSVKALTFYRSGTFSVDVQYDDVSDLQTPVKISTYTIGPFQSTKSEKAKVRVKVRLDLHGIVSVVSAILLEEEEIEVPVSKESAGESAKMETDEAPAEAAAPPSSNDNDVNMQDAKATAEAPGAENGIPETGDKPMQMDTDTQVEASKKKVKKTDIPVAEVIYGAMAPLDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNNKYQEFVIASDRENLTAKLQEVEDWLYEEGEDETKGVYVAKLEELKKQGDPIEERYKDYMERGTIIDQLIYCVNSYREAAMSNDPKFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYATPVLLSTEIRKKAEAVDRFCKPIMMKPRPAKPATPEAPATPPPQGGEQQQPQENTDANTNENAGDSGNQVPPPSTEPMETDKSENAGSA 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3835g00034 852 FunFam Heat shock 70 kDa protein 4 596 706 - -
Gabi3835g00034 852 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Gabi3835g00034 852 FunFam Heat shock 70 kDa protein 4 38 113 - -
Gabi3835g00034 852 Gene3D - 598 705 IPR029048 -
Gabi3835g00034 852 Gene3D Actin; Chain A, domain 4 230 313 - -
Gabi3835g00034 852 PANTHER HSC70CB, ISOFORM G-RELATED 1 844 - -
Gabi3835g00034 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 794 IPR029048 -
Gabi3835g00034 852 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Gabi3835g00034 852 PRINTS 70kDa heat shock protein signature 477 493 - -
Gabi3835g00034 852 PRINTS 70kDa heat shock protein signature 363 383 - -
Gabi3835g00034 852 PRINTS 70kDa heat shock protein signature 30 42 - -
Gabi3835g00034 852 PRINTS 70kDa heat shock protein signature 140 160 - -
Gabi3835g00034 852 PRINTS 70kDa heat shock protein signature 2 15 - -
Gabi3835g00034 852 PRINTS 70kDa heat shock protein signature 332 348 - -
Gabi3835g00034 852 FunFam Heat shock 70 kDa protein 4 1 86 - -
Gabi3835g00034 852 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gabi3835g00034 852 CDD HSPA4_like_NDB 2 381 - -
Gabi3835g00034 852 FunFam Heat shock 70 kDa protein 4 230 313 - -
Gabi3835g00034 852 Gene3D - 186 360 - -
Gabi3835g00034 852 FunFam Heat shock 70 kDa protein 14 387 594 - -
Gabi3835g00034 852 MobiDBLite consensus disorder prediction 507 523 - -
Gabi3835g00034 852 MobiDBLite consensus disorder prediction 809 852 - -
Gabi3835g00034 852 MobiDBLite consensus disorder prediction 791 808 - -
Gabi3835g00034 852 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gabi3835g00034 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 696 IPR029048 -
Gabi3835g00034 852 Gene3D - 5 374 - -
Gabi3835g00034 852 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Gabi3835g00034 852 MobiDBLite consensus disorder prediction 507 568 - -
Gabi3835g00034 852 FunFam Heat shock 70 kDa protein 4 109 203 - -
Gabi3835g00034 852 Gene3D - 38 113 - -
Gabi3835g00034 852 MobiDBLite consensus disorder prediction 784 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3835g00034 Gabi-Chr3835 357815 363299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3835g00034 4 438 Calmodulin-binding Proteins AT1G16030 34.475 5.99e-85 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3835g00034 K09489 - gmx:100778196 1460.28