Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3835g00019 ATGTCATACATTAGCAATGTCATAGAAGGCCTCAAGCCTGCGATTCTGATGGTGGTGGTTCAATTTTCTTATGCTGGGGTTAGCATCTTGTACAAATTGGTTGCCAATGATGGCATGAGCTTGAGTGTCCTTATGGCCTATCGCTTCCTCTTTGCATCGGCTTTCATGGTTCCTCTTGCCTTCTTCATTGAAAGGAAGAGCAAGCCAAAGATCACAGTGAAAGTGGTCATTCAATCATTTCTTTGTGGACTTTTTGGAGCATCCTTACAACAAAATTTGTTTGTGGAAGCGGTGGCTTTGGCAACTGCATCATATGCTACGGCCATGTACAACCTCATTCCTGGTGCCACCTTCATCTTAGCCGTTTGTTTTGGATTGGAAAGTTTAAACGTTAGAACATCAACAGGGAAGGCCAAAGTGCTTGGCACTCTAATGGGAATTGGTGGAGCCATGATCCTCACCTTCTATAAGAGCACTGAGATTCATCTCTGGTCAACGCATGTGAACCTCATTCGACATATACAGCCACACAATGTTTCTACAACTCAAATTTTGGGTTCTGCTCTTGCTTTGGGCACTTGTATCTCATATTCAATATGGTTGATAATTCAGGCAAGGATGAGTGAGAAGTTTCCTTGGCATTATACAAGTGCGGCTTTGATGTCAGTGATGGCCTCCATTCAATCAATTATATTTGCTCTATGCATGGAAAGAGATTGGAATCAATGGAAGCTTGGCTGGAATATCAGACTTCTCACTGTAGCTTATACGGGTATTGTGGCCTCTGGACTAGCTTGGGTTCTCATTATGTGGTGCGTGCGATTAAAAGGCCCACTTTATGCTTCCATTTTCAACCCTCTCTTCCTTGTTCTAGTGTCCATTGCAGGGTCTCTGATATTAGATGAAATGCTCCATTTGGGCAGCATAATAGGATCAGTATTGATTATCTCCGGGCTATATATTGTCTTGTGGGGTAAAGGTAGAGAATTAAAGAGAATTGCAGAGCAAAAGATAACAAAAGGCTCACACGGAGTTGAACCATTGGAGATAATTACCACAAATCATGCAGATGGTAAAAGTGTTGAAAATGATAGCAGTGACTTGAAGAATGGTATTAGTACTCAGTTTAACGGTCATTTATCAAAAGAAGGAAAAGGACAAAATGCAGTGAAAGATGTTTCAATAAATGACACAGAAGAAAATAAAATCAAGGATATCCCAATTGACCATCAAGGATTCAAAACCTAG 1248 0.4103 MSYISNVIEGLKPAILMVVVQFSYAGVSILYKLVANDGMSLSVLMAYRFLFASAFMVPLAFFIERKSKPKITVKVVIQSFLCGLFGASLQQNLFVEAVALATASYATAMYNLIPGATFILAVCFGLESLNVRTSTGKAKVLGTLMGIGGAMILTFYKSTEIHLWSTHVNLIRHIQPHNVSTTQILGSALALGTCISYSIWLIIQARMSEKFPWHYTSAALMSVMASIQSIIFALCMERDWNQWKLGWNIRLLTVAYTGIVASGLAWVLIMWCVRLKGPLYASIFNPLFLVLVSIAGSLILDEMLHLGSIIGSVLIISGLYIVLWGKGRELKRIAEQKITKGSHGVEPLEIITTNHADGKSVENDSSDLKNGISTQFNGHLSKEGKGQNAVKDVSINDTEENKIKDIPIDHQGFKT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3835g00019 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 328 - -
Gabi3835g00019 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Gabi3835g00019 415 PANTHER WAT1-RELATED PROTEIN 13 330 IPR030184 GO:0016020|GO:0022857
Gabi3835g00019 415 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020
Gabi3835g00019 415 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3835g00019 Gabi-Chr3835 189472 192957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3835g00019 1 331 Nodulin-like Gene Family AT1G68170 44.807 4.06e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3835g00019 - - aprc:113856022 619.772