Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3835g00007 ATGAAGAAAGAAAATAGTGTCATCTTGAAATCTGGAGAGTTCACCGGTCGATTGACTCGTGCTCGAGCTGCTGCTTTTCGTGCATCTGGACAGTTGCCCCCTCTGAAGGGGGTAGCACAAGCCAGTCAGAAGCAGCCCTTAGGAGCCAATCCAAAAAGAGCAGTTTCAGATAATACATGTCTTCCGCATAAAAAGAGGGTTGCTCTTCAGGATGTCACTAACGTTTGCTGTGAAAATACATATAGGAGCTGTTTCAATGCAACTAAAATTCAGACTAAGAAAAGCAAGCTGGCTAAGACTGTTCAACTTAATGTTTCCAAAGTAGTTCCTTCAGTTGCTGTGGAGCTACCACAACTTCAAGTTGATTCAAAAGGAAAGAGTTTTCCAGAAACAGGGCTTAGATCAGAAGATGCTATGTGCTCAACTAATTTGGAAGACAATGCAGATGCACTTCTTTGGCTAAGAGCCAACCAGTGTGGCACACATGATAGTCTGCTTGACAGCCAGACATCTGGAATATCTTCTGAGCCTTTGATTTCTCAAGAGAGAGCTGTACAAATTGTTGCAGCTAAGAAAAGTAGCCTTTCTGAACTTTTGAATGCTTCAAAAGATCCTGATGTCACTGATATAGATGCTGATTTCGAAGATTCTCAATTGTGCAGCCTCTACGCCACTGATATCTATAACAACTTGCGTGCTACTGAGCTGTCAAGAAGGCCTTATCCTAACTTCATGGAAAGAGTACAGCAAGATATCACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGTGTCAGACACACTTTACCTCACGGTATATCTCATAGATTGGTTTCTCTCCGAAAATTACATTGAAAGACAAAGACTTCAGCTGCTTGGCATCACCTGCATGCTAATTGCTTCGAAATATGAAGAAATTAATGCCCCAAGAATTGAAGAATTCTGCTTCATCACAGACAACACATACTCAAAAGAGGAAGTACTAAAAATGGAGACTCAAGTGTTAAAGTCCTCTACATATAAACTGTTTGTTCCCACTACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCTTACAAGAGCCCCAGCTTTGAATTGGAGTACTTGGCCAATTACCTAGCTGAACTAACACTGATGAACTATAGTTTCTTAAATTTCCTTCCTTCTATGATTGCTGCATCTGCTGTATTTCTTGCCAGATGGACATTAGATCAATCAAGCCATCCATGGAATCCAACTCTTCAACACTATGCCTCTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGGATTACAGAATCTACGGCTGAATAGCAATGGCTGCCCTTTAACTGCCATCAACACAAAGTACAGGCAAGACAAGTTTAAATGTGTAGCAGCTTTGTCATCACCAAAACTGCTTGAAAGTCTGTTCTGA 1458 0.4115 MKKENSVILKSGEFTGRLTRARAAAFRASGQLPPLKGVAQASQKQPLGANPKRAVSDNTCLPHKKRVALQDVTNVCCENTYRSCFNATKIQTKKSKLAKTVQLNVSKVVPSVAVELPQLQVDSKGKSFPETGLRSEDAMCSTNLEDNADALLWLRANQCGTHDSLLDSQTSGISSEPLISQERAVQIVAAKKSSLSELLNASKDPDVTDIDADFEDSQLCSLYATDIYNNLRATELSRRPYPNFMERVQQDITQSMRGILVDWLVEVSEEYKLVSDTLYLTVYLIDWFLSENYIERQRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYSKEEVLKMETQVLKSSTYKLFVPTTKTFLRRFLRAAQASYKSPSFELEYLANYLAELTLMNYSFLNFLPSMIAASAVFLARWTLDQSSHPWNPTLQHYASYKASDLKTTVLGLQNLRLNSNGCPLTAINTKYRQDKFKCVAALSSPKLLESLF 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3835g00007 485 FunFam Cyclin A1 341 474 - -
Gabi3835g00007 485 FunFam Mitotic cyclin 6 240 340 - -
Gabi3835g00007 485 Gene3D - 226 474 - -
Gabi3835g00007 485 SUPERFAMILY Cyclin-like 354 480 IPR036915 -
Gabi3835g00007 485 PIRSF Cyclin_A_B_D_E 29 484 IPR046965 GO:0016538|GO:0044772
Gabi3835g00007 485 CDD CYCLIN_AtCycA_like_rpt1 216 347 - -
Gabi3835g00007 485 Pfam Cyclin, N-terminal domain 226 347 IPR006671 -
Gabi3835g00007 485 Pfam Cyclin, C-terminal domain 355 477 IPR004367 -
Gabi3835g00007 485 SMART Cyclin_C_2 355 478 IPR004367 -
Gabi3835g00007 485 SUPERFAMILY Cyclin-like 215 347 IPR036915 -
Gabi3835g00007 485 CDD CYCLIN_AtCycA-like_rpt2 355 469 - -
Gabi3835g00007 485 PANTHER CYCLINS 194 434 IPR039361 -
Gabi3835g00007 485 Gene3D - 240 353 - -
Gabi3835g00007 485 SMART cyclin_7 262 346 IPR013763 -
Gabi3835g00007 485 SMART cyclin_7 359 447 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3835g00007 Gabi-Chr3835 67287 74840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3835g00007 1 485 Core Cell Cycle Gene Families AT1G80370 52.352 3.65e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3835g00007 K06627 - gmx:100789757 663.685