Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3826g00007 ATGAAGAGGGAGCACGAGCATCTTCATCCCAACAACAACAACAACGCTTCTTCGATGGCGAGCTCGAGTTGCGGTGGAAAATCGAAGGTGTGGGAGGAGGAAGGTGGCATGGACGAGCTGTTAGCGGTGGTGGGTTACAAGGTGAGGTCATCGGACATGGCGGAAGTTGCACAGAAGCTTGAACAACTCGAAGAAGCCATGGGAAGCGTCCAAGACGAAATCACACAACTCTCGTCGGAAACCATTCACTACAACCCTTCCGACATCGGAAACTGGCTCGAAACCATGCTCTCCAATTTCGAACCCTTACCTCTTCAACCAGACGAATCAGACAACAACAAGCCTTTTGAAGATTCATCTTCTTCTGACTACGATCTCAAAGCCATTCCAGGCAAAGCAATCTACAGCACCATAACCGAGTCACCCTCCTCCAAACGACTCAAACCGACCGAGTCAACTCAGACATCGACTCGCCCTGTGGTCCTCGTTGATTCTCAGGAAAACGGTATCAGACTTGTCCACACCCTCATGGCGTGTGCGGAGGCTGTTCACCAGAACAACCTTCCACTGGCGGAGGCGCTGGTGAAGCAGATCGGGTTCCTCGCGGTGTCGCAGGTTGGTGCTATGAGGAAAGTCGCCACCTACTTCGCCGAAGCTTTAGCGCGCCGCATCTACAGGCTCTACCCTGAGAATCCTCTTCATCATTCTCTCTCCGACATGCTTCAGATCCATTTCTACGAGACCTGTCCTTACCTCAAGTTCGCACACTTCACCGCAAATCAAGCCATTCTCGAAGCTTTCCAAGGAAAGAATCGCGTCCACGTCATCGATTTCGGCATCAACCAAGGGATGCAGTGGCCGGCGTTGATGCAGGCACTCGCCTTGCGCCCTGGCGGTCCTCCGGCTTTCCGGTTAACCGGAATCGGACCTCCCGCCGCCGATAACTCCGACCACCTCCAACAGGTTGGTTGGAAACTCGCTCAGTTAGCCGAAACGATTCACGTCGAGTTTGAATACAGAGGCTTCGTTGCGAATAGCCTCGCGGATCTTGACGCTTCGATGCTGGAACTCAGGCCGAGTGAGACTGAGTCAGTGGCTGTTAACTCGGTGTTTGAGCTTCACAAGCTTCTGGCTCGACCCGGTGCTGTGGAGAAGGTGTTGTCCGTGGTGAGGCAGATTCGGCCGGAGATCGTGACGGTGGTGGAGCAGGAGGCGAACCACAACGGACCGGGTTTCTTGGACCGGTTCACCGAGTCGCTGCATTACTACTCGAGCCTGTTTGACTCGCTGGAGGGGTCGTCGGTGAACTCGCAGGACAAGGTGATGTCGGAGGTGTATCTGGGGAAGCAAATCTGTAACGTGGTGGCGTGTGAGGGGATGGACCGGGTGGAGAGGCACGAGACGCTGAGCCAGTGGAGGACCCGGTTCGGTTCGGCCGGGTTCACTCCGGTTCACTTGGGGTCCAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCGCTGTTTGCGGGTGGGGATGGGTATAGGGTGGAAGAGAACATTGGGTGTCTCATGCTTGGTTGGCACACTAGGCCCTTGATTGCCACCTCTGCCTGGCAACTCGCCACCAAATCGGTGGTTGCTCACTGA 1626 0.5523 MKREHEHLHPNNNNNASSMASSSCGGKSKVWEEEGGMDELLAVVGYKVRSSDMAEVAQKLEQLEEAMGSVQDEITQLSSETIHYNPSDIGNWLETMLSNFEPLPLQPDESDNNKPFEDSSSSDYDLKAIPGKAIYSTITESPSSKRLKPTESTQTSTRPVVLVDSQENGIRLVHTLMACAEAVHQNNLPLAEALVKQIGFLAVSQVGAMRKVATYFAEALARRIYRLYPENPLHHSLSDMLQIHFYETCPYLKFAHFTANQAILEAFQGKNRVHVIDFGINQGMQWPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQQVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSETESVAVNSVFELHKLLARPGAVEKVLSVVRQIRPEIVTVVEQEANHNGPGFLDRFTESLHYYSSLFDSLEGSSVNSQDKVMSEVYLGKQICNVVACEGMDRVERHETLSQWRTRFGSAGFTPVHLGSNAFKQASMLLALFAGGDGYRVEENIGCLMLGWHTRPLIATSAWQLATKSVVAH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3826g00007 541 SMART DELLA_2 38 110 - -
Gabi3826g00007 541 MobiDBLite consensus disorder prediction 1 31 - -
Gabi3826g00007 541 MobiDBLite consensus disorder prediction 11 25 - -
Gabi3826g00007 541 Pfam GRAS domain family 172 532 IPR005202 -
Gabi3826g00007 541 ProSiteProfiles GRAS family profile. 163 532 IPR005202 -
Gabi3826g00007 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 142 528 IPR005202 -
Gabi3826g00007 541 Coils Coil 53 80 - -
Gabi3826g00007 541 Pfam Transcriptional regulator DELLA protein N terminal 38 103 IPR021914 -
Gabi3826g00007 541 FunFam DELLA protein GAI 36 100 - -
Gabi3826g00007 541 MobiDBLite consensus disorder prediction 101 123 - -
Gabi3826g00007 541 Gene3D - 36 100 IPR038088 -
Gabi3826g00007 541 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3826g00007 Gabi-Chr3826 227127 229251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3826g00007 32 535 GRAS Transcription Factor Family AT1G14920 72.348 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3826g00007 GRAS 1.7e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3826g00007 K14494 - gmx:547718 844.343