Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3825g00005 ATGGCCGATGACTTTGAGTTTTCTGATAAAGTTCCTCCTTCCTTCGACCGCGCGGGCTCCCAAGGGTTTAACCCAGGCTTAATAGTTCTCCTGGTTGTTGGTGGGTTGCTGTTGACATTCCTCATTGGAAATTACGTACTCTACTCTTATGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAGTCTCCAAGAAGAAGATGAAAAAGGAGAAACTGAAGCAAGGCGTCTCTGCACCTGGAGAGTAG 249 0.4739 MADDFEFSDKVPPSFDRAGSQGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLPPRKKKPVSKKKMKKEKLKQGVSAPGE 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3825g00005 82 MobiDBLite consensus disorder prediction 58 72 - -
Gabi3825g00005 82 Pfam DNA binding protein S1FA 20 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gabi3825g00005 82 PANTHER DNA-BINDING PROTEIN S1FA2 6 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gabi3825g00005 82 MobiDBLite consensus disorder prediction 57 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3825g00005 Gabi-Chr3825 42162 43938 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gabi3825g00005 S1FA 5.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3825g00005 - - gmx:100500059 119.783