Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00065 ATGGAGAAGAAGGACATGGTTGTGAAGATGGAGGATGCTCTTGGGTCCTCTTCCTTCCCTGGTTATAATTCAAACGGTTATCCATTCTCGAGCGTGTTCGATCATTTCTCTGAGGTGGAAAAGAACTCTTTAGGGTTTATGGAGTTACTAGGGGTGCAGGACTGTAATCCTCTGCTTGATTTACCGCAACTATCAACTATGTCTGTGCCTCATCACTTTACAGTTAAGGTTCCTTCTGATGCTGGGAAAGAGTGTTCTGAGGTTTTGAACCAGCAACCTCCCACTCCTAACTCTTCTTCGATTTCATCAGCGTCCAGCGAGGCAGTCACTGATGAACAGAATAAGACTCTAGACCAAGCAGAAGAAGAAGGACAACAAAATAAGACCAAGAAACAGTTGAAGGCCAAGAAGACAAATCAGAAGAGACATAAAGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCTGTGAAAAACAGCCCCTTCCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTAAAGAAACGCGTGGAACGATCTTTTACTGATCCAAGCGTCGTAGTGACAACCTATGAAGGCCAACACATACATCCAAGCCCAGTTATGCCACGCTCAGGCCTCACCGGTGCTCCACTACCACCTGGTGTCTCCGCCACCAACTTTGGTTCAGTTTTTCCTGGAAACTACTTGTCCCAATATCAGCACCACCATCATCAACAACAACTCCTTGTCAATACATTGTCCTCTTTGGGTTTCCCTTACAACGATTCTTCATCTTCAAAGAACGGTGCTTTTACTCAAGAGAGAAGGCTTTTTAATCCTGAGACGACTGCATTTCTAAGGGATCATGGGCTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAAGAAGAGTAG 954 0.4486 MEKKDMVVKMEDALGSSSFPGYNSNGYPFSSVFDHFSEVEKNSLGFMELLGVQDCNPLLDLPQLSTMSVPHHFTVKVPSDAGKECSEVLNQQPPTPNSSSISSASSEAVTDEQNKTLDQAEEEGQQNKTKKQLKAKKTNQKRHKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSVVVTTYEGQHIHPSPVMPRSGLTGAPLPPGVSATNFGSVFPGNYLSQYQHHHHQQQLLVNTLSSLGFPYNDSSSSKNGAFTQERRLFNPETTAFLRDHGLLQDVVPSHMLKEE 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00065 317 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3823g00065 317 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3823g00065 317 SUPERFAMILY WRKY DNA-binding domain 151 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3823g00065 317 PIRSF WRKY_txn_fact_IIc 1 317 IPR017396 GO:0003700
Gabi3823g00065 317 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3823g00065 317 MobiDBLite consensus disorder prediction 84 144 - -
Gabi3823g00065 317 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 255 IPR044810 GO:0003700
Gabi3823g00065 317 MobiDBLite consensus disorder prediction 114 130 - -
Gabi3823g00065 317 Gene3D WRKY domain 143 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3823g00065 317 MobiDBLite consensus disorder prediction 85 113 - -
Gabi3823g00065 317 FunFam WRKY transcription factor 57 145 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00065 Gabi-Chr3823 620662 622710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00065 27 317 WRKY Transcription Factor Family AT2G47260 48.204 1.84e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3823g00065 WRKY 7.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00065 - - aprc:113872234 458.373