Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00060 ATGTCTCTGCTCGTGGTTTCTACGTCTTCAATCGGTGGGTTGAAAAAATTTCAATGCATGTTGCTGAGAAGGTTGCTTATATTATTATCATGTATGGTGTTTATGGTTGATTCTGGTATATATGATAAAACACTGGAAGCTCCTTCGTTATCTCCTACTTCACAGTTATCCATACCATTCACCAAAAGTAGGAACGAATTAGAACCTCCAATTTCCGGCTTCAAAAATATCGCACCTTTTCATTCTATCGCTGATGCAATTCCTTCTGCTCTGCCTCAACCACCAATGTCCCCTGTTGATTCCAATTGTTGTAAACAAGACATGGTGTTGAAACGAGGCAGTGAGAGTTGCCAATGTGTTTATCCTATAAAGCTAGACCTTCTTCTTTTGAATGTCACTCAGAACTCTGAGTGGAGTGTTTTTCTTGATGAATTGGCTACCCAACTTGGGCTGCAGACTACCCAAATTCAACTCATCAACTTTTATTTACTCAGCTTGTCGACGTTGAATATTTCGATGGACCTCACTCCGCATAAAGGGATCGGTTTCTCTGCCCATGAAGCTGCTAAAATAAACTCTTCGCTTTTGCTGCATAAGGTTCAACTAGACCATCGATTCGTGGGTGACTACAAACTTCTCAATATAACCTGGTTTCAACCTCCACCTCCTTCTCAAGCTCCTACTTTTGCCGCATCACCTCTGAAAGCTCCTCAGAAACAAGCACCTCCAGCTACAGTAAGTACTTCATCAGACCGGGACAGCCATTCAAATTTGCTCCTTGTTCTTGGAATTGTCACTGGCATACTACTCATTTCCATTGTATGTGTGCTTACACTTTGGTTATGCACATTGCGGTCAAAAACAAAAACACCTCCCACAGAAACTGAAAAGCCAAGGATGGAAAGTGCAGTTTCAGCTGTTGCGTCTCTTCCCCACCCAACCAGTACACGCTTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAATTTTGAACCAGCAAGCGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCCTAAATGATGGAACTGCTGTTGCAATTAAGAGACTTACTAATGGAGGGCAACAGGGTGACAAAGAGTTTATGGTTGAGGTTGAGATGCTTAGCCGATTGCACCATCGTAACCTTGTAAAACTAGTGGGATACTATAGTAATCGTGACTCATCACAAAATCTACTTTGCTATGAGCTTGTCCCAAATGGAAGTTTAGAGGCCTGGCTTCATGGTCCCTTGGGTATAAATTGCCCTTTGGATTGGGACACTAGAATGAAGATCGCGCTTGATGCTGCAAGAGGACTTGCATACTTGCATGAAGATTCACAGCCCTGTGTTATACATCGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTAATGCTAAAGTTGCAGATTTTGGTCTTGCAAAACAGGCACCTGAAGGCAGAGCTAATTACCTATCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCGATGACTGGACATCTACTTGTGAAAAGTGATGTTTATAGTTACGGAGTTGTCTTGCTGGAACTGTTGACGGGAAGGAAACCTGTGGATATGTCACAACCAGCTGGACAAGAGAACCTTGTTACTTGGTCAAGGCCAATTCTTAGAAATAAGGACCGGTTGGAAGAACTTGCTGATCCAAGGCTTGGGGGAAGGTACCCAAAGGAAGATTTTATCCGTGTATGCACAATCGCTGCAGCCTGTGTTGCTCCTGAAGCAAGCCAAAGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCGTCACAGAATATCATGATCCCATGTTAGCCTCATCCAATACACGGCCCAACCTGAGACAATCCTCTACCACTTATGAGTCTGATGGGACATCTTCAATGTTTTCTTCGGGTCCTTACTCTGGCCTAAGTGCTTTTGACTATGACAACATTTCTAGGACAGCTGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2028 0.43 MSLLVVSTSSIGGLKKFQCMLLRRLLILLSCMVFMVDSGIYDKTLEAPSLSPTSQLSIPFTKSRNELEPPISGFKNIAPFHSIADAIPSALPQPPMSPVDSNCCKQDMVLKRGSESCQCVYPIKLDLLLLNVTQNSEWSVFLDELATQLGLQTTQIQLINFYLLSLSTLNISMDLTPHKGIGFSAHEAAKINSSLLLHKVQLDHRFVGDYKLLNITWFQPPPPSQAPTFAASPLKAPQKQAPPATVSTSSDRDSHSNLLLVLGIVTGILLISIVCVLTLWLCTLRSKTKTPPTETEKPRMESAVSAVASLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFMVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFNAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWSRPILRNKDRLEELADPRLGGRYPKEDFIRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRVTEYHDPMLASSNTRPNLRQSSTTYESDGTSSMFSSGPYSGLSAFDYDNISRTAVFSEDLHEGR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00060 675 FunFam Receptor-like serine/threonine-protein kinase ALE2 409 625 - -
Gabi3823g00060 675 Pfam Protein tyrosine and serine/threonine kinase 335 606 IPR001245 GO:0004672|GO:0006468
Gabi3823g00060 675 Gene3D Transferase(Phosphotransferase) domain 1 409 625 - -
Gabi3823g00060 675 MobiDBLite consensus disorder prediction 224 252 - -
Gabi3823g00060 675 FunFam Receptor-like serine/threonine-protein kinase ALE2 311 408 - -
Gabi3823g00060 675 ProSiteProfiles Protein kinase domain profile. 331 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3823g00060 675 PANTHER OS01G0750732 PROTEIN 100 626 - -
Gabi3823g00060 675 MobiDBLite consensus disorder prediction 618 644 - -
Gabi3823g00060 675 SUPERFAMILY Protein kinase-like (PK-like) 307 608 IPR011009 -
Gabi3823g00060 675 Gene3D Phosphorylase Kinase; domain 1 293 408 - -
Gabi3823g00060 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Gabi3823g00060 675 CDD STKc_IRAK 337 607 - -
Gabi3823g00060 675 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00060 Gabi-Chr3823 533648 546450 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00060 53 675 Receptor kinase-like Gene Family AT4G02010 72.800 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gabi3823g00060 PK_Tyr_Ser-Thr 8.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00060 - - gmx:100792818 1081.24