Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00055 ATGGGAAGTGATCGTTTTTCTCTCACAGCTTTCAATTTCAATAGATTCCAGGACGGTAACGGTTCTATACAAGAGGAAGTTGTGTTCCACAGGGAACACAGTACCTTTGCAATAATGAAGTTAATGGGAGTAATCAACCCTCTTCCTACTACTGAACATGAGAACGAAGCCCATTGCTTCAAAGAGCAAAACCAGCAGCAGAAACATGATTCCGAATTTTACAACTTCATGTTACAAGAGTTCAATTTTGGACCTGCTTTGCAATTACAACCAAAACATCCATCTCAAGAAACTAAGGAGCTAAATAACCAGGGAGTGTCAAGTTCACAGCTTGTTGGACACAATAAGCAGGTGCCACCATCTTCTCTAGCATCATTGGAGCTCCTGAGAAATTACAGAAACAGGTTCAAGAGGCTAAGGGGGGAAAATATAAACAGTACTGAAATTTCAGTGAGTCCTCCTCAGAAGTTGTCAACTGAAGAAATAATAAGAGCTGCTGCAGCAAGGTATATCCAGCACCCTGCACAATGGGACAACAATTTTTGTGTTCCTATGCACCCTTATGGATTTGGTCTCGGAGGTTTGTCTGAGGAAGAAAATAGAGACGTTGAACTTGCTCACTTTCTTCTGGCAGTAGCTGACAGAGTAGGCTGCCAACAATTTGAACGTGCAAGCGTGTTACTTTTCCATTCTCCATGGAATTCATCAGATGGTGGAAACTCTCTTCAGAGAGTTATATTTCATTTTGCTAAAGCACTCCGAGAAAGAATCAACAAGGAAATAGGGGGAAGGATGACATTAAAGGGATGTGAGAAAAATAAAGAAAGGGAAATGATTCAGAATTTGGAATTGGATACTAACATGGCCATTACATGCCATCAAAAAATTCCTTTCAATCAAGTAATGCAGTTCGCTGGTGTACAGGCTATAGTGGAACATGTTGCATCCCAAACCAAAATCCATGTGATAGATCTTATTATCGGATGTGGGGTGATGTGCACAGCTTTGATGCAAGCACTGGCAGAGCGAAAGGAAAGGCCAGTTGAGCTTCTTAAGATAACTGCCATTGGTCTTAAAGGCAAGATTGAGCTAGAAGAGACAGGAAAAAGGTTAGTGAGTTTTGCTGAATCCTTGAACTTGCCCTTTTTATATAAGGTCGTTTTTGTTACAGACATCATAGATATCAACGAAGATCAGTTTGAAATCGATGATGATGAAGCTGTGGCTATCTACTCTCCATATATACTGAGGACTATGGTATCAAGTTCTGATTCCTTGGACAACTTGATGCGGGTGATAAGAAAAATCAGACCATGTATAATGATAGTCCTTGAATTGGAAGCAAACCATAATTCACCCTCCTTTGTGAATCGCTTCATCGAAGCATTTTTCTTCTTCTCCGCTTATTTTGACTGCGTTGAAACCTGCCTAAACGAGGATTATGAGTGCAGAATGAAAATCGAAGCAATATTATCTGAAGGGATACGAAACATTGTTGCTATGGAAGAGGGAGAAAGGAAAGTTAGGAATGTAAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACAGAATGGTGGAAACTGGATTTAGCGAGTCATCTTTGTACCAAGCTTACTTGGTTGTCAAAAAGTTTGCTTGTGGGAATTTCTGCACTCTAGACCAAAACGGGAAGTGTCTTATAATTGGTTGGAAGGGTAGCCCAATTCATTCAATCTCAGCTTGGAAGTTTCTTTAA 1737 0.4024 MGSDRFSLTAFNFNRFQDGNGSIQEEVVFHREHSTFAIMKLMGVINPLPTTEHENEAHCFKEQNQQQKHDSEFYNFMLQEFNFGPALQLQPKHPSQETKELNNQGVSSSQLVGHNKQVPPSSLASLELLRNYRNRFKRLRGENINSTEISVSPPQKLSTEEIIRAAAARYIQHPAQWDNNFCVPMHPYGFGLGGLSEEENRDVELAHFLLAVADRVGCQQFERASVLLFHSPWNSSDGGNSLQRVIFHFAKALRERINKEIGGRMTLKGCEKNKEREMIQNLELDTNMAITCHQKIPFNQVMQFAGVQAIVEHVASQTKIHVIDLIIGCGVMCTALMQALAERKERPVELLKITAIGLKGKIELEETGKRLVSFAESLNLPFLYKVVFVTDIIDINEDQFEIDDDEAVAIYSPYILRTMVSSSDSLDNLMRVIRKIRPCIMIVLELEANHNSPSFVNRFIEAFFFFSAYFDCVETCLNEDYECRMKIEAILSEGIRNIVAMEEGERKVRNVKIDVWRRFFARYRMVETGFSESSLYQAYLVVKKFACGNFCTLDQNGKCLIIGWKGSPIHSISAWKFL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00055 578 ProSiteProfiles GRAS family profile. 196 576 IPR005202 -
Gabi3823g00055 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 143 571 IPR005202 -
Gabi3823g00055 578 MobiDBLite consensus disorder prediction 91 119 - -
Gabi3823g00055 578 Pfam GRAS domain family 206 576 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00055 Gabi-Chr3823 477538 479282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00055 203 577 GRAS Transcription Factor Family AT1G66350 28.457 8.59e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3823g00055 GRAS 4.3e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00055 - - gmx:100791952 694.115