Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00053 ATGTCAGCAATATCAGTAGGAGACTCTTCAAAGACGGAGGAAAATAGGAAAACTCCAATGCTTTCTTCAAGAATTGACCATCCTTTATGCATATTCAGTGGTTTCTCTCAAGTTTCAGGAGACAAAGACCACAGCAATCAAGACGTTTTATCTGCTACAAGTGTCAAGATTCCATGTATTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGGATGGCCGAAGACCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTCAACAGAACCTGAAGAAGAAAAACATGAATTTTCTGAGGCTGAGGACCGTGTTCTATGGATGGCATTTGAGGAATATGGGTTAAATGACGAGGTACTGAATATTGTTAGCCAGTTTGTTGGGGGCACCAGTCTAGAAATTCAGGAGAGATACAAAAGTATCAAGGAAAAGAATATTGGTAGGTTGGACCAGTATTCAGAAGGCTCAGGAGAATATGAATCTCCAATTGGCATATGTCCAGGGAAAAGCCTGGGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGCCTGCATGGCTGTTCTCAACCTTTAACATATCCTAGTGAAAAGCAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCCGCAAGTCATACACAAAAAAAGGATAGGAGTTGGGAACGGATACAACATGCAGTACTCAGTCGTAGCCACACCAGAGAGCACACAAAATGGAAGAATAAAGCATGGGCAGTTAAAGGTTGTCAAACGTTTGTCAGAAGATTCAACTCCTGGGTCTTTTCAGGATAAGAAAACTGCAATTATGGAAGAGGAAGATGGGATATTGGCAACCTCTGGTGCAGCAGAACCTGGTAATCAGAGTACTACACCTTTTCTGACAGAAGCTGATTGTCATGGAGATATCAATTTAAATGTTCCTGTCTCAGAAAGTGTGGGGAAACGAAAGGTCACAGATCAGTCAGACACAGCACTATGTGACTCAACATTGCCTCCTGATGATTCTCAGAATTCTTGGAAAAAGCTGAAGAGAATCTCAGATGATGTAGTTACTGTAATTAATGATCATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACACACAATTACTTGTGCACCTTTGGACAAATCTGTTGAACATGCTTCAAATAAATTAGTAGTTTCTTCTAGCACTTGCCATGGTGAGCAAGATAAAAGTGATGGGGATGGACCAAAAGATGTCACAAATGAGACAGAATTTAAGAAGTTTTCCAATTCAATGGAAGGGCAAGTTGATGGGATGTTAGGTCTCTCGGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGTGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATTGCTAGTTATATGCATGCTGGAGGAGTGTCACTGCCCCACAGATCTATTGTTGCACCGAGTTCAATCATAGACGACAAGGGGAAAATTGATGCAGAGTGTACAGACCAAGAGATGTCATCTAGGTCCCGGTTCTTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGAAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGCCAATGTGTGGAAAGGAATGTCCTTGTGTTAATGGAGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAAAACCGATTCAGAGGATGTCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGGTTAGTTGCGGAGATGGTTCGTTAGGGGAGCCACCTCGGCGTGGAGAGGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAATCTGATGTTGCAGGATGGGGAGCCTTTTTGAAGAACCCAGTTAACAAAAATGACTACCTTGGAGAGTACACAGGTGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGATCGTGCAAACTCTTCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACAGAGTAGGCATATTCGCCAAGGAACATATTGATGCTAGTGAGGAGCTATTCTATGATTATCGTTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAAGCCTGAGGGTTCTAAGAGAGACGAATCAGCAGTTTCTCAAGGCAGAGCAAAGAAACATCAATCACATTGA 2529 0.4247 MSAISVGDSSKTEENRKTPMLSSRIDHPLCIFSGFSQVSGDKDHSNQDVLSATSVKIPCIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEPEEEKHEFSEAEDRVLWMAFEEYGLNDEVLNIVSQFVGGTSLEIQERYKSIKEKNIGRLDQYSEGSGEYESPIGICPGKSLGAALDSFDNLFCRRCLQIFDCRLHGCSQPLTYPSEKQTVWSEPEGDRKPCSDQCYLQPQVIHKKRIGVGNGYNMQYSVVATPESTQNGRIKHGQLKVVKRLSEDSTPGSFQDKKTAIMEEEDGILATSGAAEPGNQSTTPFLTEADCHGDINLNVPVSESVGKRKVTDQSDTALCDSTLPPDDSQNSWKKLKRISDDVVTVINDHSKNLNLGACDESKHTITCAPLDKSVEHASNKLVVSSSTCHGEQDKSDGDGPKDVTNETEFKKFSNSMEGQVDGMLGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSLPHRSIVAPSSIIDDKGKIDAECTDQEMSSRSRFLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQPMCGKECPCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVSQGRAKKHQSH 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00053 842 SMART sant 473 523 IPR001005 -
Gabi3823g00053 842 SMART sant 115 165 IPR001005 -
Gabi3823g00053 842 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3823g00053 842 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 20 842 IPR025778 GO:0031519
Gabi3823g00053 842 SMART set_7 693 814 IPR001214 GO:0005515
Gabi3823g00053 842 MobiDBLite consensus disorder prediction 101 120 - -
Gabi3823g00053 842 Pfam SET domain 704 807 IPR001214 GO:0005515
Gabi3823g00053 842 FunFam Putative histone-lysine N-methyltransferase EZH2 594 810 - -
Gabi3823g00053 842 MobiDBLite consensus disorder prediction 354 374 - -
Gabi3823g00053 842 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 11 841 IPR045318 GO:0006338|GO:0042054
Gabi3823g00053 842 Pfam CXC domain 632 663 IPR041355 -
Gabi3823g00053 842 ProSiteProfiles CXC domain profile. 580 679 IPR026489 -
Gabi3823g00053 842 MobiDBLite consensus disorder prediction 819 835 - -
Gabi3823g00053 842 ProSiteProfiles SET domain profile. 693 808 IPR001214 GO:0005515
Gabi3823g00053 842 MobiDBLite consensus disorder prediction 813 842 - -
Gabi3823g00053 842 SUPERFAMILY SET domain 594 811 IPR046341 -
Gabi3823g00053 842 Gene3D SET domain 594 810 IPR046341 -
Gabi3823g00053 842 SMART CXC_2 628 665 IPR033467 -
Gabi3823g00053 842 MobiDBLite consensus disorder prediction 432 452 - -
Gabi3823g00053 842 CDD SET_EZH 693 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00053 Gabi-Chr3823 462224 475109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00053 682 811 C2H2 Transcription Factor Family AT2G23740 26.531 4.14e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi3823g00053 SET 9.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00053 - - gmx:100808730 1406.35