Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00052 ATGGTGTCCAAACCTACCGACTCTGCTCCCAAACTTCGAAAACAATATGGGGAGTCAGCAAATGATGCTGTTGGAACCTTGTCCATCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGTATCAATTAAAGAAAAACTTCAGAGGAATGAGAAGAAGCTACAATGTCATATTTCAGGGGTCATGTCAGCAATATCAGTAGGAGACTCTTCAAAGACGGAGGAAAATAGGAAAACTCCAATGCTTTCTTCAAGAATTGACCATCCTTTATGCATATTCAGTGGTTTCTCTCAAGTTTCAGGAGACAAAGACCACAGCAATCAAGACGTTTTATCTGCTACAAGTGTCAAGATTCCATGTATTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGGATGGCCGAAGACCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTCAACAGAACCTGAAGAAGAAAAACATGAATTTTCTGAGGCTGAGGACCGTGTTCTATGGATGGCATTTGAGGAATATGGGTTAAATGACGAGGTACTGAATATTGTTAGCCAGTTTGTTGGGGGCACCAGTCTAGAAATTCAGGAGAGATACAAAAGTATCAAGGAAAAGAATATTGGTAGGTTGGACCAGTATTCAGAAGGCTCAGGAGAATATGAATCTCCAATTGGCATATGTCCAGGGAAAAGCCTGGGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGCCTGCATGGCTGTTCTCAACCTTTAACATATCCTAGTGAAAAGCAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGGGAAAATGTGTAAAGACTAAGGGAGCGTTTGGTACAGGAGAAATTTTTTTTTGCTGGGAACAAATATTTGTTGGAAAAAAAGTGGAAAGTTTTTTTTACCGGCAGTTAAAGGTTGTCAAACGTTTGTCAGAAGATTCAACTCCTGGGTCTTTTCAGGATAAGAAAACTGCAATTATGGAAGAGGAAGATGGGATATTGGCAACCTCTGGTGCAGCAGAACCTGGTAATCAGAGTACTACACCTTTTCTGACAGAAGCTGATTGTCATGGAGATATCAATTTAAATGTTCCTGTCTCAGAAAGTGTGGGGAAACGAAAGGTCACAGATCAGTCAGACACAGCACTATGTGACTCAACATTGCCTCCTGATGATTCTCAGAATTCTTGGAAAAAGCTGAAGAGAATCTCAGATGATGTAGTTACTGTAATTAATGATCATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACACACAATTACTTGTGCACCTTTGGACAAATCTGTTGAACATGCTTCAAATAAATTAGTAGTTTCTTCTAGCACTTGCCATGGTGAGCAAGATAAAAGTGATGGGGATGGACCAAAAGATGTCACAAATGAGACAGAATTTAAGAAGTTTTCCAATTCAATGGAAGGGCAAGTTGATGGGATGTTAGGTCTCTCGGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGTGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATTGCTAGTTATATGCATGCTGGAGGAGTGTCACTGCCCCACAGATCTATTGTTGCACCGAGTTCAATCATAGACGACAAGGGGAAAATTGATGCAGAGTGTACAGACCAAGAGATGTCATCTAGGTCCCGGTTCTTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGAAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGCCAATGTGTGGAAAGGAATGTCCTTGTGTTAATGGAGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAAAACCGATTCAGAGGATGTCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGGTTAGTTGCGGAGATGGTTCGTTAGGGGAGCCACCTCGGCGTGGAGAGGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAATCTGATGTTGCAGGATGGGGAGCCTTTTTGAAGAACCCAGTTAACAAAAATGACTACCTTGGAGAGTACACAGGTGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGATCGTGCAAACTCTTCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACAGAGTAGGCATATTCGCCAAGGAACATATTGATGCTAGTGAGGAGCTATTCTATGATTATCGTTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAAGCCTGAGGGTTCTAAGAGAGACGAATCAGCAGTTTCTCAAGGCAGAGCAAAGAAACATCAATCACATTGA 2715 0.4192 MVSKPTDSAPKLRKQYGESANDAVGTLSIKINQLKKQIQAERIVSIKEKLQRNEKKLQCHISGVMSAISVGDSSKTEENRKTPMLSSRIDHPLCIFSGFSQVSGDKDHSNQDVLSATSVKIPCIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEPEEEKHEFSEAEDRVLWMAFEEYGLNDEVLNIVSQFVGGTSLEIQERYKSIKEKNIGRLDQYSEGSGEYESPIGICPGKSLGAALDSFDNLFCRRCLQIFDCRLHGCSQPLTYPSEKQTVWSEPEGDRKPCSDQCYLQGKCVKTKGAFGTGEIFFCWEQIFVGKKVESFFYRQLKVVKRLSEDSTPGSFQDKKTAIMEEEDGILATSGAAEPGNQSTTPFLTEADCHGDINLNVPVSESVGKRKVTDQSDTALCDSTLPPDDSQNSWKKLKRISDDVVTVINDHSKNLNLGACDESKHTITCAPLDKSVEHASNKLVVSSSTCHGEQDKSDGDGPKDVTNETEFKKFSNSMEGQVDGMLGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSLPHRSIVAPSSIIDDKGKIDAECTDQEMSSRSRFLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQPMCGKECPCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVSQGRAKKHQSH 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00052 904 MobiDBLite consensus disorder prediction 494 514 - -
Gabi3823g00052 904 SMART set_7 755 876 IPR001214 GO:0005515
Gabi3823g00052 904 ProSiteProfiles SET domain profile. 755 870 IPR001214 GO:0005515
Gabi3823g00052 904 MobiDBLite consensus disorder prediction 875 904 - -
Gabi3823g00052 904 SMART sant 179 229 IPR001005 -
Gabi3823g00052 904 SMART sant 535 585 IPR001005 -
Gabi3823g00052 904 CDD SET_EZH 755 871 - -
Gabi3823g00052 904 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 904 IPR025778 GO:0031519
Gabi3823g00052 904 MobiDBLite consensus disorder prediction 881 897 - -
Gabi3823g00052 904 Gene3D SET domain 656 872 IPR046341 -
Gabi3823g00052 904 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 903 IPR045318 GO:0006338|GO:0042054
Gabi3823g00052 904 SUPERFAMILY SET domain 656 873 IPR046341 -
Gabi3823g00052 904 Pfam CXC domain 694 725 IPR041355 -
Gabi3823g00052 904 Pfam SET domain 766 869 IPR001214 GO:0005515
Gabi3823g00052 904 MobiDBLite consensus disorder prediction 165 185 - -
Gabi3823g00052 904 FunFam Putative histone-lysine N-methyltransferase EZH2 656 872 - -
Gabi3823g00052 904 ProSiteProfiles CXC domain profile. 642 741 IPR026489 -
Gabi3823g00052 904 SMART CXC_2 690 727 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00052 Gabi-Chr3823 462224 475870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00052 744 873 C2H2 Transcription Factor Family AT2G23740 26.531 3.33e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi3823g00052 SET 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00052 - - gmx:100808730 1504.19