Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00049 ATGGTGTCCAAACCTACCGACTCTGCTCCCAAACTTCGAAAACAATATGGGGAGTCAGCAAATGATGCTGTTGGAACCTTGTCCATCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGTATCAATTAAAGAAAAACTTCAGAGGAATGAGAAGAAGCTACAATGTCATATTTCAGGGGTCATGTCAGCAATATCAGTAGGAGACTCTTCAAAGACGGAGGAAAATAGGAAAACTCCAATGCTTTCTTCAAGAATTGACCATCCTTTATGCATATTCAGTGGTTTCTCTCAAGTTTCAGGAGACAAAGACCACAGCAATCAAGACGTTTTATCTGCTACAAGTGTCAAGATTCCATGTATTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGGATGGCCGAAGACCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTCAACAGAACCTGAAGAAGAAAAACATGAATTTTCTGAGGCTGAGGACCGTGTTCTATGGATGGCATTTGAGGAATATGGGTTAAATGACGAGGTACTGAATATTGTTAGCCAGTTTGTTGGGGGCACCAGTCTAGAAATTCAGGAGAGATACAAAAGTATCAAGGAAAAGAATATTGGTAGGTTGGACCAGTATTCAGAAGGCTCAGGAGAATATGAATCTCCAATTGGCATATGTCCAGGGAAAAGCCTGGGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGCCTGCATGGCTGTTCTCAACCTTTAACATATCCTAGTGAAAAGCAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCCGCAAGTCATACACAAAAAAAGGATAGGAGTTGGGAACGGATACAACATGCAGTACTCAGTCGTAGCCACACCAGAGAGCACACAAAATGGAAGAATAAAGCATGGGCAGTTAAAGGTTGTCAAACGTTTGTCAGAAGATTCAACTCCTGGGTCTTTTCAGGATAAGAAAACTGCAATTATGGAAGAGGAAGATGGGATATTGGCAACCTCTGGTGCAGCAGAACCTGAAAGTGTGGGGAAACGAAAGGTCACAGATCAGTCAGACACAGCACTATGTGACTCAACATTGCCTCCTGATGATTCTCAGAATTCTTGGAAAAAGCTGAAGAGAATCTCAGATGATGTAGTTACTGTAATTAATGATCATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACACACAATTACTTGTGCACCTTTGGACAAATCTGTTGAACATGCTTCAAATAAATTAGTAGTTTCTTCTAGCACTTGCCATGGTGAGCAAGATAAAAGTGATGGGGATGGACCAAAAGATGTCACAAATGAGACAGAATTTAAGAAGTTTTCCAATTCAATGGAAGGGCAAGTTGATGGGATGTTAGGTCTCTCGGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGTGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATTGCTAGTTATATGCATGCTGGAGGAGTGTCACTGCCCCACAGATCTATTGTTGCACCGAGTTCAATCATAGACGACAAGGGGAAAATTGATGCAGAGTGTACAGACCAAGAGATGTCATCTAGGTCCCGGTTCTTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGAAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGCCAATGTGTGGAAAGGAATGTCCTTGTGTTAATGGAGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAAAACCGATTCAGAGGATGTCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGGTTAGTTGCGGAGATGGTTCGTTAGGGGAGCCACCTCGGCGTGGAGAGGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAATCTGATGTTGCAGGATGGGGAGCCTTTTTGAAGAACCCAGTTAACAAAAATGACTACCTTGGAGAGTACACAGGTGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGATCGTGCAAACTCTTCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACAGAGTAGGCATATTCGCCAAGGAACATATTGATGCTAGTGAGGAGCTATTCTATGATTATCGTTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAAGCCTGAGGGTTCTAAGAGAGACGAATCAGCAGTTTCTCAAGGCAGAGCAAAGAAACATCAATCACATTGA 2646 0.4248 MVSKPTDSAPKLRKQYGESANDAVGTLSIKINQLKKQIQAERIVSIKEKLQRNEKKLQCHISGVMSAISVGDSSKTEENRKTPMLSSRIDHPLCIFSGFSQVSGDKDHSNQDVLSATSVKIPCIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEPEEEKHEFSEAEDRVLWMAFEEYGLNDEVLNIVSQFVGGTSLEIQERYKSIKEKNIGRLDQYSEGSGEYESPIGICPGKSLGAALDSFDNLFCRRCLQIFDCRLHGCSQPLTYPSEKQTVWSEPEGDRKPCSDQCYLQPQVIHKKRIGVGNGYNMQYSVVATPESTQNGRIKHGQLKVVKRLSEDSTPGSFQDKKTAIMEEEDGILATSGAAEPESVGKRKVTDQSDTALCDSTLPPDDSQNSWKKLKRISDDVVTVINDHSKNLNLGACDESKHTITCAPLDKSVEHASNKLVVSSSTCHGEQDKSDGDGPKDVTNETEFKKFSNSMEGQVDGMLGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSLPHRSIVAPSSIIDDKGKIDAECTDQEMSSRSRFLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQPMCGKECPCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVSQGRAKKHQSH 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00049 881 SMART set_7 732 853 IPR001214 GO:0005515
Gabi3823g00049 881 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 880 IPR045318 GO:0006338|GO:0042054
Gabi3823g00049 881 CDD SET_EZH 732 848 - -
Gabi3823g00049 881 MobiDBLite consensus disorder prediction 858 874 - -
Gabi3823g00049 881 Gene3D SET domain 633 849 IPR046341 -
Gabi3823g00049 881 SMART CXC_2 667 704 IPR033467 -
Gabi3823g00049 881 MobiDBLite consensus disorder prediction 382 417 - -
Gabi3823g00049 881 ProSiteProfiles CXC domain profile. 619 718 IPR026489 -
Gabi3823g00049 881 FunFam Putative histone-lysine N-methyltransferase EZH2 633 849 - -
Gabi3823g00049 881 SUPERFAMILY SET domain 633 850 IPR046341 -
Gabi3823g00049 881 Pfam SET domain 743 846 IPR001214 GO:0005515
Gabi3823g00049 881 MobiDBLite consensus disorder prediction 471 491 - -
Gabi3823g00049 881 Pfam CXC domain 671 702 IPR041355 -
Gabi3823g00049 881 SMART sant 179 229 IPR001005 -
Gabi3823g00049 881 SMART sant 512 562 IPR001005 -
Gabi3823g00049 881 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 881 IPR025778 GO:0031519
Gabi3823g00049 881 MobiDBLite consensus disorder prediction 165 185 - -
Gabi3823g00049 881 MobiDBLite consensus disorder prediction 402 416 - -
Gabi3823g00049 881 ProSiteProfiles SET domain profile. 732 847 IPR001214 GO:0005515
Gabi3823g00049 881 MobiDBLite consensus disorder prediction 852 881 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00049 Gabi-Chr3823 462224 475870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00049 721 850 C2H2 Transcription Factor Family AT2G23740 26.531 3.69e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi3823g00049 SET 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00049 - - gmx:100808730 1456.43