Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00046 ATGGTGTCCAAACCTACCGACTCTGCTCCCAAACTTCGAAAACAATATGGGGAGTCAGCAAATGATGCTGTTGGAACCTTGTCCATCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGTATCAATTAAAGAAAAACTTCAGAGGAATGAGAAGAAGCTACAATGTCATATTTCAGGGGTCATGTCAGCAATATCAGTAGGAGACTCTTCAAAGACGGAGGAAAATAGGAAAACTCCAATGCTTTCTTCAAGAATTGACCATCCTTTATGCATATTCAGTGGTTTCTCTCAAGTTTCAGGAGACAAAGACCACAGCAATCAAGACGTTTTATCTGCTACAAGTGTCAAGATTCCATGTATTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGGATGGCCGAAGACCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTCAACAGAACCTGAAGAAGAAAAACATGAATTTTCTGAGGCTGAGGACCGTGTTCTATGGATGGCATTTGAGGAATATGGGTTAAATGACGAGGTACTGAATATTGTTAGCCAGTTTGTTGGGGGCACCAGTCTAGAAATTCAGGAGAGATACAAAAGTATCAAGGAAAAGAATATTGGTAGGTTGGACCAGTATTCAGAAGGCTCAGGAGAATATGAATCTCCAATTGGCATATGTCCAGGGAAAAGCCTGGGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGCCTGCATGGCTGTTCTCAACCTTTAACATATCCTAGTGAAAAGCAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAAGGTTGTCAAACGTTTGTCAGAAGATTCAACTCCTGGGTCTTTTCAGGATAAGAAAACTGCAATTATGGAAGAGGAAGATGGGATATTGGCAACCTCTGGTGCAGCAGAACCTGGTAATCAGAGTACTACACCTTTTCTGACAGAAGCTGATTGTCATGGAGATATCAATTTAAATGTTCCTGTCTCAGAAAGTGTGGGGAAACGAAAGGTCACAGATCAGTCAGACACAGCACTATGTGACTCAACATTGCCTCCTGATGATTCTCAGAATTCTTGGAAAAAGCTGAAGAGAATCTCAGATGATGTAGTTACTGTAATTAATGATCATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACACACAATTACTTGTGCACCTTTGGACAAATCTGTTGAACATGCTTCAAATAAATTAGTAGTTTCTTCTAGCACTTGCCATGGTGAGCAAGATAAAAGTGATGGGGATGGACCAAAAGATGTCACAAATGAGACAGAATTTAAGAAGTTTTCCAATTCAATGGAAGGGCAAGTTGATGGGATGTTAGGTCTCTCGGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGTGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATTGCTAGTTATATGCATGCTGGAGGAGTGTCACTGCCCCACAGATCTATTGTTGCACCGAGTTCAATCATAGACGACAAGGGGAAAATTGATGCAGAGTGTACAGACCAAGAGATGTCATCTAGGTCCCGGTTCTTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGAAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGCCAATGTGTGGAAAGGAATGTCCTTGTGTTAATGGAGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAAAACCGATTCAGAGGATGTCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGGTTAGTTGCGGAGATGGTTCGTTAGGGGAGCCACCTCGGCGTGGAGAGGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAATCTGATGTTGCAGGATGGGGAGCCTTTTTGAAGAACCCAGTTAACAAAAATGACTACCTTGGAGAGTACACAGGTGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGATCGTGCAAACTCTTCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACAGAGTAGGCATATTCGCCAAGGAACATATTGATGCTAGTGAGGAGCTATTCTATGATTATCGTTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAAGCCTGAGGGTTCTAAGAGAGACGAATCAGCAGTTTCTCAAGGCAGAGCAAAGAAACATCAATCACATTGA 2613 0.4221 MVSKPTDSAPKLRKQYGESANDAVGTLSIKINQLKKQIQAERIVSIKEKLQRNEKKLQCHISGVMSAISVGDSSKTEENRKTPMLSSRIDHPLCIFSGFSQVSGDKDHSNQDVLSATSVKIPCIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEPEEEKHEFSEAEDRVLWMAFEEYGLNDEVLNIVSQFVGGTSLEIQERYKSIKEKNIGRLDQYSEGSGEYESPIGICPGKSLGAALDSFDNLFCRRCLQIFDCRLHGCSQPLTYPSEKQTVWSEPEGDRKPCSDQCYLQQLKVVKRLSEDSTPGSFQDKKTAIMEEEDGILATSGAAEPGNQSTTPFLTEADCHGDINLNVPVSESVGKRKVTDQSDTALCDSTLPPDDSQNSWKKLKRISDDVVTVINDHSKNLNLGACDESKHTITCAPLDKSVEHASNKLVVSSSTCHGEQDKSDGDGPKDVTNETEFKKFSNSMEGQVDGMLGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSLPHRSIVAPSSIIDDKGKIDAECTDQEMSSRSRFLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQPMCGKECPCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVSQGRAKKHQSH 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00046 870 SUPERFAMILY SET domain 622 839 IPR046341 -
Gabi3823g00046 870 MobiDBLite consensus disorder prediction 391 405 - -
Gabi3823g00046 870 Pfam SET domain 732 835 IPR001214 GO:0005515
Gabi3823g00046 870 SMART set_7 721 842 IPR001214 GO:0005515
Gabi3823g00046 870 ProSiteProfiles CXC domain profile. 608 707 IPR026489 -
Gabi3823g00046 870 MobiDBLite consensus disorder prediction 847 863 - -
Gabi3823g00046 870 ProSiteProfiles SET domain profile. 721 836 IPR001214 GO:0005515
Gabi3823g00046 870 SMART sant 179 229 IPR001005 -
Gabi3823g00046 870 SMART sant 501 551 IPR001005 -
Gabi3823g00046 870 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 870 IPR025778 GO:0031519
Gabi3823g00046 870 SMART CXC_2 656 693 IPR033467 -
Gabi3823g00046 870 MobiDBLite consensus disorder prediction 382 406 - -
Gabi3823g00046 870 FunFam Putative histone-lysine N-methyltransferase EZH2 622 838 - -
Gabi3823g00046 870 MobiDBLite consensus disorder prediction 841 870 - -
Gabi3823g00046 870 MobiDBLite consensus disorder prediction 165 185 - -
Gabi3823g00046 870 Gene3D SET domain 622 838 IPR046341 -
Gabi3823g00046 870 CDD SET_EZH 721 837 - -
Gabi3823g00046 870 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 869 IPR045318 GO:0006338|GO:0042054
Gabi3823g00046 870 MobiDBLite consensus disorder prediction 460 480 - -
Gabi3823g00046 870 Pfam CXC domain 660 691 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00046 Gabi-Chr3823 462224 475870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00046 710 839 C2H2 Transcription Factor Family AT2G23740 26.531 3.41e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi3823g00046 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00046 - - gmx:100808730 1517.29