Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00044 ATGGTGTCCAAACCTACCGACTCTGCTCCCAAACTTCGAAAACAATATGGGGAGTCAGCAAATGATGCTGTTGGAACCTTGTCCATCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCGGAGAGAATTGTATCAATTAAAGAAAAACTTCAGAGGAATGAGAAGAAGCTACAATGTCATATTTCAGGGGTCATGTCAGCAATATCAGTAGGAGACTCTTCAAAGACGGAGGAAAATAGGAAAACTCCAATGCTTTCTTCAAGAATTGACCATCCTTTATGCATATTCAGTGGTTTCTCTCAAGTTTCAGGAGACAAAGACCACAGCAATCAAGACGTTTTATCTGCTACAAGTGTCAAGATTCCATGTATTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGACAGAAATCAGAGGATGGCCGAAGACCAGTCAGTTGTTGGAAGAAGACGTATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTCAACAGAACCTGAAGAAGAAAAACATGAATTTTCTGAGGCTGAGGACCGTGTTCTATGGATGGCATTTGAGGAATATGGGTTAAATGACGAGGTACTGAATATTGTTAGCCAGTTTGTTGGGGGCACCAGTCTAGAAATTCAGGAGAGATACAAAAGTATCAAGGAAAAGAATATTGGTAGGTTGGACCAGTATTCAGAAGGCTCAGGAGAATATGAATCTCCAATTGGCATATGTCCAGGGAAAAGCCTGGGTGCTGCATTAGATTCTTTTGATAACCTTTTCTGTCGCCGGTGCCTGCAGATTTTTGACTGTCGCCTGCATGGCTGTTCTCAACCTTTAACATATCCTAGTGAAAAGCAGACAGTTTGGTCTGAGCCTGAAGGTGACAGGAAACCATGCAGTGATCAGTGTTACCTTCAGGATAAGAAAACTGCAATTATGGAAGAGGAAGATGGGATATTGGCAACCTCTGGTGCAGCAGAACCTGGTAATCAGAGTACTACACCTTTTCTGACAGAAGCTGATTGTCATGGAGATATCAATTTAAATGTTCCTGTCTCAGAAAGTGTGGGGAAACGAAAGGTCACAGATCAGTCAGACACAGCACTATGTGACTCAACATTGCCTCCTGATGATTCTCAGAATTCTTGGAAAAAGCTGAAGAGAATCTCAGATGATGTAGTTACTGTAATTAATGATCATAGCAAGAACCTAAATTTGGGTGCATGTGATGAAAGTAAACACACAATTACTTGTGCACCTTTGGACAAATCTGTTGAACATGCTTCAAATAAATTAGTAGTTTCTTCTAGCACTTGCCATGGTGAGCAAGATAAAAGTGATGGGGATGGACCAAAAGATGTCACAAATGAGACAGAATTTAAGAAGTTTTCCAATTCAATGGAAGGGCAAGTTGATGGGATGTTAGGTCTCTCGGATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGTGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAATTGCTAGTTATATGCATGCTGGAGGAGTGTCACTGCCCCACAGATCTATTGTTGCACCGAGTTCAATCATAGACGACAAGGGGAAAATTGATGCAGAGTGTACAGACCAAGAGATGTCATCTAGGTCCCGGTTCTTGAGGAAAAGGGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGAAAAAACCAATCTTGCAAGCAGTATACACCATGTGGATGTCAGCCAATGTGTGGAAAGGAATGTCCTTGTGTTAATGGAGGAACTTGCTGTGAAAAATATTGTGGTTGTTCAAAGAGCTGCAAAAACCGATTCAGAGGATGTCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGCCGAAATTGCTGGGTTAGTTGCGGAGATGGTTCGTTAGGGGAGCCACCTCGGCGTGGAGAGGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGCAAAATCTGATGTTGCAGGATGGGGAGCCTTTTTGAAGAACCCAGTTAACAAAAATGACTACCTTGGAGAGTACACAGGTGAACTGATCTCCCACCGAGAAGCCGATAAGCGTGGGAAAATATATGATCGTGCAAACTCTTCTTTTCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAACCCCAACTGCTATGCAAAGGTGATGCTGGTTGCTGGAGATCACAGAGTAGGCATATTCGCCAAGGAACATATTGATGCTAGTGAGGAGCTATTCTATGATTATCGTTATGGTCCAGATCAAGCACCCCCATGGGCTCGTAAGCCTGAGGGTTCTAAGAGAGACGAATCAGCAGTTTCTCAAGGCAGAGCAAAGAAACATCAATCACATTGA 2559 0.4224 MVSKPTDSAPKLRKQYGESANDAVGTLSIKINQLKKQIQAERIVSIKEKLQRNEKKLQCHISGVMSAISVGDSSKTEENRKTPMLSSRIDHPLCIFSGFSQVSGDKDHSNQDVLSATSVKIPCIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEESTEPEEEKHEFSEAEDRVLWMAFEEYGLNDEVLNIVSQFVGGTSLEIQERYKSIKEKNIGRLDQYSEGSGEYESPIGICPGKSLGAALDSFDNLFCRRCLQIFDCRLHGCSQPLTYPSEKQTVWSEPEGDRKPCSDQCYLQDKKTAIMEEEDGILATSGAAEPGNQSTTPFLTEADCHGDINLNVPVSESVGKRKVTDQSDTALCDSTLPPDDSQNSWKKLKRISDDVVTVINDHSKNLNLGACDESKHTITCAPLDKSVEHASNKLVVSSSTCHGEQDKSDGDGPKDVTNETEFKKFSNSMEGQVDGMLGLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSLPHRSIVAPSSIIDDKGKIDAECTDQEMSSRSRFLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQPMCGKECPCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESAVSQGRAKKHQSH 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00044 852 MobiDBLite consensus disorder prediction 829 845 - -
Gabi3823g00044 852 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 852 IPR025778 GO:0031519
Gabi3823g00044 852 Pfam SET domain 714 817 IPR001214 GO:0005515
Gabi3823g00044 852 Pfam CXC domain 642 673 IPR041355 -
Gabi3823g00044 852 SMART CXC_2 638 675 IPR033467 -
Gabi3823g00044 852 SUPERFAMILY SET domain 604 821 IPR046341 -
Gabi3823g00044 852 MobiDBLite consensus disorder prediction 823 852 - -
Gabi3823g00044 852 Gene3D SET domain 604 820 IPR046341 -
Gabi3823g00044 852 ProSiteProfiles SET domain profile. 703 818 IPR001214 GO:0005515
Gabi3823g00044 852 MobiDBLite consensus disorder prediction 442 462 - -
Gabi3823g00044 852 SMART sant 179 229 IPR001005 -
Gabi3823g00044 852 SMART sant 483 533 IPR001005 -
Gabi3823g00044 852 CDD SET_EZH 703 819 - -
Gabi3823g00044 852 FunFam Putative histone-lysine N-methyltransferase EZH2 604 820 - -
Gabi3823g00044 852 ProSiteProfiles CXC domain profile. 590 689 IPR026489 -
Gabi3823g00044 852 MobiDBLite consensus disorder prediction 165 185 - -
Gabi3823g00044 852 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 21 851 IPR045318 GO:0006338|GO:0042054
Gabi3823g00044 852 SMART set_7 703 824 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00044 Gabi-Chr3823 462224 475870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00044 692 821 C2H2 Transcription Factor Family AT2G23740 26.531 3.70e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi3823g00044 SET 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00044 - - gmx:100808730 1489.94