Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00039 ATGGCCTCGACTCAGCGTCCTGTAAGTTCAGGATCGGAAGGTGGAGATCCGCAGATGGACGAGAGGAAGAGGAAGAGGATGCTGTCGAACCGCGAATCGGCGAGGAGATCGCGGATGAGGAAGCAGAAACAGATGGAAGACCTAACCAACGAAGTGAGCAGATTGCAAAGCGAGAATAAGCAGCTAGCTCAGAGCATAAAGGTGAAGGAGGAACAGTACGCGGAGATGGAAGCAGCCAATGACATCGTGAAGGTTCAGACAATGGAACTCGCTGATCGATTGCGCTTTTTGAACTCCATCCTTGAGATCGCTGAAGATGTTAATGTGTTCTCCGATGAGATCCCTCTGATACCAGATTCTCTCCTCAACCCCTGGCAGATTCCTTATCCAATTCACCCCATTATGGCCTCCGCAGATATGTTAATGCATTGA 432 0.4977 MASTQRPVSSGSEGGDPQMDERKRKRMLSNRESARRSRMRKQKQMEDLTNEVSRLQSENKQLAQSIKVKEEQYAEMEAANDIVKVQTMELADRLRFLNSILEIAEDVNVFSDEIPLIPDSLLNPWQIPYPIHPIMASADMLMH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00039 143 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Gabi3823g00039 143 Gene3D - 20 75 - -
Gabi3823g00039 143 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 140 - -
Gabi3823g00039 143 SUPERFAMILY Leucine zipper domain 22 76 IPR046347 GO:0003700|GO:0006355
Gabi3823g00039 143 FunFam BZIP transcription factor 20 71 - -
Gabi3823g00039 143 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Gabi3823g00039 143 Pfam bZIP transcription factor 22 79 IPR004827 GO:0003700|GO:0006355
Gabi3823g00039 143 Coils Coil 31 79 - -
Gabi3823g00039 143 CDD bZIP_plant_GBF1 23 74 IPR045314 GO:0003700|GO:0006355
Gabi3823g00039 143 MobiDBLite consensus disorder prediction 16 48 - -
Gabi3823g00039 143 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 77 IPR004827 GO:0003700|GO:0006355
Gabi3823g00039 143 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00039 Gabi-Chr3823 423901 425208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00039 1 141 bZIP Transcription Factor Family AT3G62420 51.034 3.72e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3823g00039 bZIP_1 9.8e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00039 K25786 - gmx:780550 196.052