Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00032 ATGGAACAAGTTGTGTTGCTAGTTGATGATTTAAGATTACTTTCTGGGATTTCTCGCTGTAGAATATGTCACGAAGAAGAATTTGAGAGCTCCAAAAGCTTGGAAGCTCCTTGTGCTTGTTCTGGGACCGTTAAGTTTGCTCATAGAGATTGCATACAGACATGGTGCAATGAGAAAGGAAATACAACTTGTGAAATATGTCTCCAGCAATATGAACCTGGATATACAGCACCTCCAAAGAAATCTCAAGTATGTGACGCAGCAATGACCATAAGGGATAGCCTACAAATTTCAAGGAGTGAACAAGAACCGTCCAACAGAAGAATAGTGGAAATAGTTGAAGGAGTAGCATTAGAAAACAATTACTCTGAATGCACATATGCTGCAGATAGAAGCGCGTCTTGTTGTCGATCACTGGCTTTAGCTTTTACCCTCATCTTGCTTGTAAGACATCTTTTCGCATTGCTTGCAAATGGAATGGAAGATTATCCATTTACAATTCTTACGGTCTTTATACTAAGGGCAAGTGGAATTATTATACCCATGTACATAATTATTAGGACGATCGGATCCATTCATAATAGTATTGGGCACCACTATTATCAGGATTCTAACAATGACTCATCAATGTCTGATGAAGATGACGAAGAAAATGAGACTTCAAATGATGTTATTTCAAGATATTCATAG 690 0.3797 MEQVVLLVDDLRLLSGISRCRICHEEEFESSKSLEAPCACSGTVKFAHRDCIQTWCNEKGNTTCEICLQQYEPGYTAPPKKSQVCDAAMTIRDSLQISRSEQEPSNRRIVEIVEGVALENNYSECTYAADRSASCCRSLALAFTLILLVRHLFALLANGMEDYPFTILTVFILRASGIIIPMYIIIRTIGSIHNSIGHHYYQDSNNDSSMSDEDDEENETSNDVISRYS 229
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00032 229 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 18 194 IPR033275 -
Gabi3823g00032 229 FunFam E3 ubiquitin-protein ligase MARCH4 9 77 - -
Gabi3823g00032 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 77 IPR013083 -
Gabi3823g00032 229 CDD RING_CH-C4HC3_MARCH 20 67 - -
Gabi3823g00032 229 ProSiteProfiles Zinc finger RING-CH-type profile. 12 74 IPR011016 GO:0008270
Gabi3823g00032 229 SUPERFAMILY RING/U-box 19 72 - -
Gabi3823g00032 229 SMART ringv_2 19 68 IPR011016 GO:0008270
Gabi3823g00032 229 Pfam RING-variant domain 20 67 IPR011016 GO:0008270
Gabi3823g00032 229 MobiDBLite consensus disorder prediction 203 229 - -
Gabi3823g00032 229 Pfam Protein of unknown function (DUF3675) 73 189 IPR022143 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3823g00032 Gabi-Chr3823 365205 367714 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00032 20 67 C3H Transcription Factor Family AT2G37950 44.898 1.24e-07 48.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00032 - - gmx:100797029 365.155