Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00020 ATGGCTCGTCCAAGAGCCAACCTCTTGTTCCTTCTTTGCGCTCTGTGCTATTCTCTCAGTGCCATTGCGGGAAAGAGCTATTACGATATACTTCAAGTATCGAAGGGCGCATCGGACGAGCAGATAAAGAGGGCGTATCGGAAGCTGGCGTTGAAGTACCATCCAGATAAGAATCCAGGCAACCAAGAAGCTAATAAGAGATTTGCTGAGATTAACAATGCTTATGAAGTACTTTCCGATAGCGAGAAGAGAAACATTTATGACAAGTATGGTGAAGAGGGTTTGAAACAGCATTCTGTAGGTGGAGGCAGAGGCGGTGGAATGGGAATGGACTTCCAAGACATCTTCAGCTCCTTCTTTGGAGGAGGTTCGATGGAGGAGGAGGAAGAGAGAATTGTGAAAGGTGATGATGTGATTGTTGAATTGGATGCAACCCTGGAAGATTTGTACATGGGAGGTTCCTTGAAGGTTTGGAGGGAGAAAAATGTTTTAAAGCCTGCACCTGGGAAGAGACGCTGTAACTGTAGAAATGAGGTTTATCACAGGCAAATAGGTCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCTAATGTTAAATATGAAAGAGATGGTTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGACGGACAGGAAGTGCTATTTTATGAGGATGGTGAGCCCATAATTGATGGAGAACCTGGAGATCTTAGGTTTCGTATCCGTACAGCACCCCATGACCTCTTCAGAAGGGAAGGCAATGACTTGCACACCTCTGTCACTATAACTCTGGTTCAAGCCCTTGTTGGCTTTGAGAAGACTATTAAACACCTTGATGAGCATCTGGTGGACATAAGCACGAAGGGAATCACAAATCCAAAGCAAGTGAGGAAGTTCAAAGGAGAGGGCATGCCGCTGCATATGAGCACAAAGAAAGGAGATCTTTACGTCACATTTGAGGTTGTATTCCCCAACTCACTAACGGAGGAGCAGAAAACAAATATAAAAGCAATTCTTGATTAA 1041 0.4428 MARPRANLLFLLCALCYSLSAIAGKSYYDILQVSKGASDEQIKRAYRKLALKYHPDKNPGNQEANKRFAEINNAYEVLSDSEKRNIYDKYGEEGLKQHSVGGGRGGGMGMDFQDIFSSFFGGGSMEEEEERIVKGDDVIVELDATLEDLYMGGSLKVWREKNVLKPAPGKRRCNCRNEVYHRQIGPGMFQQMTEQVCEQCPNVKYERDGYFITVDIEKGMQDGQEVLFYEDGEPIIDGEPGDLRFRIRTAPHDLFRREGNDLHTSVTITLVQALVGFEKTIKHLDEHLVDISTKGITNPKQVRKFKGEGMPLHMSTKKGDLYVTFEVVFPNSLTEEQKTNIKAILD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00020 346 Gene3D DnaJ domain 23 129 IPR036869 -
Gabi3823g00020 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 255 339 IPR008971 GO:0006457|GO:0051082
Gabi3823g00020 346 FunFam DnaJ subfamily B member 11 251 346 - -
Gabi3823g00020 346 SUPERFAMILY Chaperone J-domain 24 123 IPR036869 -
Gabi3823g00020 346 CDD DnaJ_C 136 333 - -
Gabi3823g00020 346 Gene3D - 252 330 - -
Gabi3823g00020 346 Gene3D - 130 251 - -
Gabi3823g00020 346 PRINTS DnaJ domain signature 63 83 IPR001623 -
Gabi3823g00020 346 PRINTS DnaJ domain signature 83 102 IPR001623 -
Gabi3823g00020 346 PRINTS DnaJ domain signature 28 46 IPR001623 -
Gabi3823g00020 346 PRINTS DnaJ domain signature 46 61 IPR001623 -
Gabi3823g00020 346 CDD DnaJ 27 80 IPR001623 -
Gabi3823g00020 346 SUPERFAMILY HSP40/DnaJ peptide-binding domain 133 258 IPR008971 GO:0006457|GO:0051082
Gabi3823g00020 346 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Gabi3823g00020 346 Pfam DnaJ C terminal domain 140 330 IPR002939 -
Gabi3823g00020 346 Pfam DnaJ domain 27 88 IPR001623 -
Gabi3823g00020 346 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Gabi3823g00020 346 FunFam DnaJ protein ERDJ3B 23 129 - -
Gabi3823g00020 346 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 7 345 - -
Gabi3823g00020 346 SMART dnaj_3 25 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00020 Gabi-Chr3823 236051 241221 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00020 18 90 C2H2 Transcription Factor Family AT1G74250 39.744 2.00e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00020 K09517 - gmx:100799151 605.134