Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3823g00018 TGGTCAAGATCCAACCTCTTGTTCCTTCTATACGCTTTGTGCTATTCTCCCATTGCCATTGCGGGCAAAAAGAGCTATTACGATATATTTTAAGTATCAAAGGGCGCATCGGACGAGTAGATAAAGAGGGCGTATAGGAAGCTGGCTTTGAAGTACCATCCAGATAAGAATCTGGGCAACCAAGAAGCTAATAAGAGGTTTGATGAGATTAACAATGCGTATGAAGTACTTTCTGATAGCGAGAAGAGAAACATTTATGACAAGTATGGTGAAAAGGGTTTGAAACAACATTCTGTAGATGGAGGCAAAGACGGTGGAATGGGCATGGACTTCCAAGGCATCTTTAGCTCCTTCTTCTTCGGAGGATCCATGGAGGAAGAGGAAGAGAGAATTGTCAAAGGTGATGACATGATTGTTGAATTGGATGCAACCGTGGAAGATTTGTACATGGGAGGTTCATTGAAGGTTTGGAGGGAGAAAATTGTTTTAAAGCCTGCACCTGGGAAGAGACGCTGTAACTGTAGAAATGAGTTTAATCACAGGCAAATAGGTCCTGGGATGTTTCAACAGATGACAGAGCAGGTCTGTGAGCAATGTCCTAATGTTAAATATGAAAGAGATGGTTATTTCATCACTGTTGATATTGAGAAAGGCATGCAAGACGGACAGTCGACTAAGGCACGATATTTAGACGACTAA 699 0.4192 WSRSNLLFLLYALCYSPIAIAGKKSYYDIFXVSKGASDEXIKRAYRKLALKYHPDKNLGNQEANKRFDEINNAYEVLSDSEKRNIYDKYGEKGLKQHSVDGGKDGGMGMDFQGIFSSFFFGGSMEEEEERIVKGDDMIVELDATVEDLYMGGSLKVWREKIVLKPAPGKRRCNCRNEFNHRQIGPGMFQQMTEQVCEQCPNVKYERDGYFITVDIEKGMQDGQSTKARYLDD 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3823g00018 232 Gene3D DnaJ domain 21 128 IPR036869 -
Gabi3823g00018 232 SUPERFAMILY Chaperone J-domain 21 121 IPR036869 -
Gabi3823g00018 232 Pfam DnaJ domain 26 87 IPR001623 -
Gabi3823g00018 232 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 12 225 - -
Gabi3823g00018 232 PRINTS DnaJ domain signature 27 45 IPR001623 -
Gabi3823g00018 232 PRINTS DnaJ domain signature 45 60 IPR001623 -
Gabi3823g00018 232 PRINTS DnaJ domain signature 82 101 IPR001623 -
Gabi3823g00018 232 PRINTS DnaJ domain signature 62 82 IPR001623 -
Gabi3823g00018 232 Gene3D - 129 228 - -
Gabi3823g00018 232 ProSiteProfiles dnaJ domain profile. 25 90 IPR001623 -
Gabi3823g00018 232 CDD DnaJ 26 79 IPR001623 -
Gabi3823g00018 232 ProSitePatterns Nt-dnaJ domain signature. 67 86 IPR018253 -
Gabi3823g00018 232 Coils Coil 60 80 - -
Gabi3823g00018 232 SMART dnaj_3 24 82 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3823g00018 Gabi-Chr3823 155974 165846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3823g00018 23 89 C2H2 Transcription Factor Family AT1G74250 41.667 6.79e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3823g00018 K09517 - mof:131155090 356.295