Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3820g00062 ATGGCAATAGATTTGTCAAGGATCTCTATACGGCCATTCAAGCTAAGCGATGTTGATGATGTATTATTATGGGCAGGAGATGATAGAGTAACTAAGAATGCTAGAATGGAGACTTGTGGTTCAAGGGTAGAGGCTTTGGCTTTCATTAGAGATGAATACATTCACCCATTGGGAAGGTCAATATGCCTTGATGACATGTCCATTGGGATTGTTTGGGTGCTTCCTTGGCGTGGTGATGATAGGTATAAAGCAGATTTGGGGTATGCTTTAGGGTTCAACTATTGGGGCCATGGGATAGCCACCACAGCACTGAAGATTGTTTTGTCCCAAGTCTTCCAAGAGTTCCCTCATCTGAGAAGGTTGCAGGCTTTCACTCTTGTAGAGAACAAGGCTTCCCAGAGGGTATTGGAAAAGGTAGGGTTCCATAGGGAAGGACTGCTCAGAATGTTCTTTAATTTCAAAGGGAAATTAGACGATTTATTTGTTTTTAGTTTTTTGTCAACTGATGGAATTCCTTATTCAGTGTAG 528 0.4186 MAIDLSRISIRPFKLSDVDDVLLWAGDDRVTKNARMETCGSRVEALAFIRDEYIHPLGRSICLDDMSIGIVWVLPWRGDDRYKADLGYALGFNYWGHGIATTALKIVLSQVFQEFPHLRRLQAFTLVENKASQRVLEKVGFHREGLLRMFFNFKGKLDDLFVFSFLSTDGIPYSV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3820g00062 175 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 159 IPR000182 GO:0016747
Gabi3820g00062 175 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 169 - -
Gabi3820g00062 175 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 166 IPR016181 -
Gabi3820g00062 175 Gene3D - 2 165 - -
Gabi3820g00062 175 Pfam Acetyltransferase (GNAT) domain 7 142 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3820g00062 Gabi-Chr3820 488462 488989 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi3820g00062 Acetyltransf_3 4e-21 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3820g00062 - - gmx:100802886 263.462