Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3820g00061 ATGGTTATGGCAATAGATTTGTCAAGGATCTCTATACGGCCATTCAAGCTAAGCGATGTTGATGATGTATTTTTATGGGCAGGAGATGATAGAGTAACTCAGAATACTAGAATGGAGACTTGTGGTTCAAGGGTAGAGGCTTTGGCTTTCATTAGAGATGAATGCATTCACCCATTGAGAAGGTCAATATGCCTTGATGACAGGTCCATTGGGATTATTTGGGTGCTTCCTTGGCGTGGTGATAATAGTGATAGGTATAAAGCAGATTTGGGGTATGCTTTAGGAGTCAACTATTGGGGCCATGGGATAGCCACCACAGCACTGAAGATTGTTCTGCCCCAAGTCTTCCAAGACTTCCCTCATCTGCGAAGGTTGCAGGCTTTCACTCTTGTAGAGAACAAGGCTTCCCAGAGGGTATTGGAAAAGGTAGGGTTCCATAGGGAAGGACTGCTCAGAATGTTCTTTTATTCCAAAGGGAACTTAGAGGATTTCTTTGTTTTTAGTTTTTTGTCAACTGATGAAATTCCTCATTCAGTGTAG 540 0.4259 MVMAIDLSRISIRPFKLSDVDDVFLWAGDDRVTQNTRMETCGSRVEALAFIRDECIHPLRRSICLDDRSIGIIWVLPWRGDNSDRYKADLGYALGVNYWGHGIATTALKIVLPQVFQDFPHLRRLQAFTLVENKASQRVLEKVGFHREGLLRMFFYSKGNLEDFFVFSFLSTDEIPHSV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3820g00061 179 Pfam Acetyltransferase (GNAT) domain 9 146 IPR000182 GO:0016747
Gabi3820g00061 179 Gene3D - 4 169 - -
Gabi3820g00061 179 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 170 IPR016181 -
Gabi3820g00061 179 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 162 IPR000182 GO:0016747
Gabi3820g00061 179 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3820g00061 Gabi-Chr3820 482801 483566 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi3820g00061 Acetyltransf_3 3.8e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3820g00061 - - gmx:100802886 274.633