Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3820g00051 ATGGCCAAAAAATATGAAGGGCATTGTATTGGAATTGATCTTGGAACGACCTATTCATGTGTTGCAGTATGGCAAGAGCAAAACAATAGAGCTGAAATCATACACAATGAACAAGGCAACAGAATCACTCCTTCTTGTGTTGCTTTCACAGACAACCAAAGGTTGATAGGTGATGCTGCAAGAAATCAGGCTGCTACCAATCCATCCAACACTATCTTCGATGCAAAGCGGTTAATTGGAAGAAAATATAATGATTCTGTTATCCAGAATGACCTGAATCTGTGGCCATTTAAGGTTGTTGCTGGTACTGACGACAGACCCATTATCGTTGTTAAATATAAGGACGAGGAAAAACACCTTACTGCCGAGGAAATCTCATCTATGATCCTCTCGAAGATGCGGGAAATTGCAGAGACATTTTTGGAGTCACCGGTAAAGAATGCTGTTATTACTGTCCCTGCTTATTTTAATGACTCTCAGCGTCAAGCTACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCCACTGCTGCAGCTCTTGCATATGGGCTTCAGAAGAGAGCTAATTGTGTTGGTGAGAGAAATATTTTCATCTTTGATCTCGGTGGTGGCACTTTTGATGTATCTATTCTCATGATTAAGGATGATACCTTTGAAGTTAAGGCCACTGCTGGAGACACTCATCTTGGAGGAGAGGATTTCGATAACAGAATGGTGAACCACTTTGTACAGGAATTTTGTAGGAAGAAGAAAGTGGACATTAGTAAGAACCCAAGAGCACTGAGGAGGTTGAGAACTGCGTGTGAGAAGGCTAAAAGGGTACTTTCATACGACACTGAGACCACTATTGAGGTTGATGCTATATGTGATGGTATTGACCTCCTTTCATCAGTCACTCGTGCCAAGTTTGAGCAACTCAACATTGACCTCTTTAGTAAGTGTATGGATACTGTAGAGAGGTGTCTTATTGATTCAAAGGTGGACAAGAGCAATGTAGATGACGTTGTTCTTGTCGGTGGTTCTTCTAGGATTCCCAAGGTGCAGCAACTAATGCAAGATTTCTTTAAGGGGAAGGATATCTGTAAGAGTATCAACCCGGATGAAGCTGTTGCATATGGAGCATCTGTTCAGGCTGCTTTGTTGAGTAAAGGCAATAAGTTTGTTCCAAATCTGGTGCTAGTGGATGTTACACCTCTGTCTCTTGGTGTATCCACAAAAGGAGACCTCATGAGTGTAGTGATTCCGAGGAACACTGCCATTCCTGCAAAGAGAAAAGAAGTGTATTCAACTGATAGAGATAACCAATCTGCGGTCTTTATTCAGGTTTATGAGGGTGAGAGAGCAAGAGCTAGTGATAATAACTTGCTTGGTTCGTTTACTCTTTTGGTTCCTCCTGCTCCCAGAGGCCTTCCAATCAAAGTATGCTTAGCTATAGATGATGATGGTATATTAAACGTCTCTGCTGAGGAAGAAACTACTAGCCGCAAGAAAGAAATTACAATAACAAATGAAAAGGGAAGATTATCAGCCGATGAAATTGAGAGAATGTGTAAGGAAGCTGTAATTTACGAAGCTGAAGATATTAAGTACCAGAAGAAGGTTAAAGCAATGAAGGCCTTGGATGATTACATTTACAATATGAGGAAAGTTATCAAGGAAGAGTATGTGAGTTCCGTGCTTCCCAAGCTTGATAAGATTAAGATCAAAGGTGCAATTACAAAGGGCAAAGATTTGGTTGATGGCTACCAGCTGGAAGAAGAATGTGTGTTCGTTAACTATTTGAAGGAGCTAGAGATCATGTTTGAATCCGTTTTGGCCAAGATCAACCAATGTAGTTCTGATGAGGAAAGTGGCAGAATGGCAAAACAACATGAAGGATGTGCGGTAGGAATCGACCTTGGAACGACATACTCATGTGTTGCAGTATGGCAAGAGCAACACAATCGTGCGGAGATTATCCACAACGACCAAGGCAACAATATCACTCCTTCTTGTGTTGCTTTCACTGACAATCAAAGGTTGATTGGCGATGCTGCTAAGAATCAGGCTGCCTCAAACCCCACCAACACTGTCTTTGATGCGAAAAGGCTGATTGGTAGAAGATATAGTGATCCCACTATTCAAAATGATCTAATGTTATGGCTATTCAAGGTCATTGCTGGTACTAATGACAAATCGATGATCCTTGTTTCATACAAGGATAAGGAAAAACAAATATCTGCCGAGAAAATCTCATCCATGATCCTCACAAAGATGCGCGAGATTGCAGAGGCATATTTGGAGTCACCGCGTCAAGCTACTAAAGATGCTGGTGCCATTGTATGCTTTGCTATAGATGAAAATGGTATCCTGACTGTTTCTGCTAGGGAAAATGCCACTGGAAATGAGAACGAGATTACCATAACCATTGACAAAGAAAGGCTGTCAACAGAAGAAATAAAAAAATTGATGCAAGAAGCTGAGAATTACAAGGCCGAAGATAAAGAACTTCCGTATGAAGGTTGA 2526 0.4125 MAKKYEGHCIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRITPSCVAFTDNQRLIGDAARNQAATNPSNTIFDAKRLIGRKYNDSVIQNDLNLWPFKVVAGTDDRPIIVVKYKDEEKHLTAEEISSMILSKMREIAETFLESPVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLQKRANCVGERNIFIFDLGGGTFDVSILMIKDDTFEVKATAGDTHLGGEDFDNRMVNHFVQEFCRKKKVDISKNPRALRRLRTACEKAKRVLSYDTETTIEVDAICDGIDLLSSVTRAKFEQLNIDLFSKCMDTVERCLIDSKVDKSNVDDVVLVGGSSRIPKVQQLMQDFFKGKDICKSINPDEAVAYGASVQAALLSKGNKFVPNLVLVDVTPLSLGVSTKGDLMSVVIPRNTAIPAKRKEVYSTDRDNQSAVFIQVYEGERARASDNNLLGSFTLLVPPAPRGLPIKVCLAIDDDGILNVSAEEETTSRKKEITITNEKGRLSADEIERMCKEAVIYEAEDIKYQKKVKAMKALDDYIYNMRKVIKEEYVSSVLPKLDKIKIKGAITKGKDLVDGYQLEEECVFVNYLKELEIMFESVLAKINQCSSDEESGRMAKQHEGCAVGIDLGTTYSCVAVWQEQHNRAEIIHNDQGNNITPSCVAFTDNQRLIGDAAKNQAASNPTNTVFDAKRLIGRRYSDPTIQNDLMLWLFKVIAGTNDKSMILVSYKDKEKQISAEKISSMILTKMREIAEAYLESPRQATKDAGAIVCFAIDENGILTVSARENATGNENEITITIDKERLSTEEIKKLMQEAENYKAEDKELPYEG 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3820g00051 841 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 617 IPR029048 -
Gabi3820g00051 841 FunFam heat shock 70 kDa protein-like 73 128 - -
Gabi3820g00051 841 FunFam Molecular chaperone DnaK 636 788 - -
Gabi3820g00051 841 FunFam heat shock 70 kDa protein-like 699 754 - -
Gabi3820g00051 841 FunFam Heat shock 70 kDa protein 392 544 - -
Gabi3820g00051 841 Gene3D - 626 796 - -
Gabi3820g00051 841 Pfam Hsp70 protein 635 769 IPR013126 GO:0005524|GO:0140662
Gabi3820g00051 841 Pfam Hsp70 protein 781 836 IPR013126 GO:0005524|GO:0140662
Gabi3820g00051 841 Pfam Hsp70 protein 10 607 IPR013126 GO:0005524|GO:0140662
Gabi3820g00051 841 SUPERFAMILY Actin-like ATPase domain 634 781 IPR043129 -
Gabi3820g00051 841 PANTHER HEAT SHOCK PROTEIN 70KDA 10 575 IPR013126 GO:0005524|GO:0140662
Gabi3820g00051 841 FunFam Heat shock 70 kDa 237 320 - -
Gabi3820g00051 841 Gene3D - 10 386 - -
Gabi3820g00051 841 FunFam Heat shock protein 70 10 200 - -
Gabi3820g00051 841 Coils Coil 813 833 - -
Gabi3820g00051 841 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Gabi3820g00051 841 Gene3D - 545 618 IPR029048 -
Gabi3820g00051 841 ProSitePatterns Heat shock hsp70 proteins family signature 1. 638 645 IPR018181 -
Gabi3820g00051 841 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Gabi3820g00051 841 Gene3D - 73 128 - -
Gabi3820g00051 841 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 777 836 IPR029047 -
Gabi3820g00051 841 Gene3D - 194 368 - -
Gabi3820g00051 841 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Gabi3820g00051 841 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 545 IPR029047 -
Gabi3820g00051 841 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 544 IPR029047 -
Gabi3820g00051 841 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Gabi3820g00051 841 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Gabi3820g00051 841 Gene3D Actin; Chain A, domain 4 237 320 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 211 221 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 339 355 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 60 68 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 397 416 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 8 21 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 38 50 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 148 168 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 371 391 - -
Gabi3820g00051 841 PRINTS 70kDa heat shock protein signature 476 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3820g00051 Gabi-Chr3820 431724 440478 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3820g00051 781 836 Calmodulin-binding Proteins AT3G12580 67.857 9.52e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3820g00051 K03283 - gmx:102667572 836.639