Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3819g00002 ATGTTCAAGTTTGTTATCACCAGAGGAGTAGCGGCATCTCAGCGCAACCACAATGCTTTTGCTTCTTTCAATTTCTCTCGGTGTGTTCATTCATTACCCTTTGCCACAGTAGAAGCAGAAGAGATATCAGGTTCTAGGCCTGCTGAAGTTCTGAACTTGGTGCAGGGTAAATGGGTCGGATCTTCAAACTGGAGTACAGTTGTGGATCCCTTAAATGGAGACTCATTTATCAAAGTTGCGGAAGTTGATGGATCAGGCATTCAGCCCTTCGTGAAAAGCTTGTACGGCTGTCCAAAACATGGCATGCACAATCCTTTTAAGGCACCAGAGAGATATCTTATGCTTGGAGATGTATCTACTAAGGCAGCTCACATGTTATCGCTTCCTAAGGTTTCAGATTTCTTTACAAGGCTAATTCAAAGAGTTTCTCCAAAGAGTTACCAGCAGGCTTTTGGGGAAGTTTATGTGACACAGAAGTTTCTAGAGAATTTCTGCGGAGACCAGGTTCGATTCCTGGCAAGGTCTTTTGCAGTGCCCGGTAATCATCTTGGACAGCAAAGTCATGGTTTTCGTTGGCCATATGGCCCGGTGGCAATTATTACTCCCTTTAATTTTCCGTTAGAGATTCCAGTACTTCAATTGATGGGTGCACTTTATATGGGCAACAAACCAACCCTTAAAGTCGATAGCAAGGTGAGCATTGTTATGGAGCAAATGTTGCGCCTGCTTCATACATGTGGTCTACCTGTAGAAGATGTAGACTTCATAAATTCTGATGGAATGACAATGAACAAGCTGTTGCAAGAGGCAAATCCACGAATGACACTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCAGTTGATTTGAGTGGCCGTGTTAAATTGGAAGATGCTGGATTTGACTGGAAAATACTGGGTCCTGATGTCCGTCAGGAAGATTACGTTGCATGGGTATGTGACCAGGATGCATACGCATGCAGTGGTCAGAAGTGCTCAGCACAGTCATTGTTATTTATGCACGAGAACTGGTCTAATACTTCCTTGATATCTAAGATGAAAGATCTTGCTGACAGAAGAAAGCTAGAGGACTTGACAATTGGCCCAGTACTCACTTTTATCACCGATTCAATGCTAGAACACATGAATAAATTACTTGAGATACCTGGATCAAAGCTGCTCTTTGGCGGTCAGCCTCTGGAGGACCATTCAATTCCATCTATTTATGGTGTTATTAAACCCACTGCCATTTATGTTCCTCTTGAGGAAATTATGAAGGATAAGAATTTCGAACTTGTGACTAAAGAAATTTTCGGACCTTTTCAGGTTATTACTGACTACAAAAGCAGTCAACTATCAATTGTGTTGGATGCTTTGGAAAGATTGCATGCGCATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGCAACACAGTTAATGGTACTACTTATGCTGGTCTAAGAGCAAGGACAACTGGAGCTCCACAGAATCATTGGTTTGGACCTGCTGGGGACCCTAGGGGTGCAGGAATTGGAACACCAGAGGCAATAAAACTTGTATGGTCTTGCCACAGAGAAATTATCTATGATGTTGGGCCTGTGCCAAAGCATTGGGAAATTCCTCCATCAACTTAA 1659 0.4262 MFKFVITRGVAASQRNHNAFASFNFSRCVHSLPFATVEAEEISGSRPAEVLNLVQGKWVGSSNWSTVVDPLNGDSFIKVAEVDGSGIQPFVKSLYGCPKHGMHNPFKAPERYLMLGDVSTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAFGEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPTLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGMTMNKLLQEANPRMTLFTGSSRVAEKLAVDLSGRVKLEDAGFDWKILGPDVRQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWSNTSLISKMKDLADRRKLEDLTIGPVLTFITDSMLEHMNKLLEIPGSKLLFGGQPLEDHSIPSIYGVIKPTAIYVPLEEIMKDKNFELVTKEIFGPFQVITDYKSSQLSIVLDALERLHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDVGPVPKHWEIPPST 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3819g00002 552 Pfam Aldehyde dehydrogenase family 130 494 IPR015590 GO:0016491
Gabi3819g00002 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 302 IPR016162 GO:0016491
Gabi3819g00002 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Gabi3819g00002 552 FunFam Aldehyde dehydrogenase 12 309 497 - -
Gabi3819g00002 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 303 493 IPR016163 GO:0016620
Gabi3819g00002 552 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 28 552 IPR044638 GO:0004029
Gabi3819g00002 552 SUPERFAMILY ALDH-like 52 520 IPR016161 GO:0016491
Gabi3819g00002 552 FunFam probable aldehyde dehydrogenase 43 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3819g00002 Gabi-Chr3819 39374 54242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3819g00002 1 552 Aldehyde Dehydrogenase Gene Family AT5G62530 78.058 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3819g00002 K00294 - gmx:100806579 1013.83