Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3818g00001 ATGGATGAAGATAAGCCTGGGAAACAAAATGATGCTGCTGTCTTACCTTGGCCTTTGGAAACAAGGGGAGTTATTGGGAAGGAAACAGGGGGAGCAACTATACCTGAATCTAATGATCCTCCTTGTGATCCTCCTGGTCATTATCATCCTGTGTCTCCTATAACTAATGTGCTTCCTCTATCTCTGGTTCTTCTCGTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGTCCATAAACAATAATATGATAGATGTTTTGCAAGATCAAAAGTGGGAGTCTATGCCCTGGAAAAAGTTGCAGGTTGGAGACATTGTCAAGGTAAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCATGGCTAGTACAAATGCAGATGGTGTCTGCTACATTGAGACCGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCAGAGAAGGCTTCTGAGTTTAAAGGTGAAGTTGAATGTGAACAACCAAACAATTCATTGTATACCTTTACTGGAAATCTTATAACTCAAAAGCAAACACTGTCTCTCAATCCAAACCAAATTTTGTTGCGAGGGTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACGGGACATGAAACAAAGGTTATGATGAATGCAATGAACGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTAGACAAGCTCATACTCACTCTATTTGGAACTCTCTTTATGATGTGCTTTATTGGGGCCATAGGCAGTGCTATCTTTGTAAACAAAAAATATTTTTACTTACATCTTGATTCATCGGAAGAGGGCTCAGCACAGTTCAACCCTAGAAACAGATTTTTGGTTTTTCTTCTGACTATGTTTACCCTTATCACACTATACTCAACAATCATCCCCATTTCACTTTATGTGTCTATAGAGATGGTAAAGTTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATAAAGAAACTAATACACCTGCATTGGCCAGAACTTCAAACCTGAATGAAGAGCTTGGGCAGGTGGAATACATTTTCTCTGACAAAACCGGGACTCTGACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGTGAGACTGAAATTGAGAGGGGAATAGCAGAGCGCAATGGCATGAAAATTGAGGAAAATAGATCACCCAATGCAGCGCAAGAGAGGGGTTTTAATTTTGATGATGCTAGGCTTATGAGAGGTGCTTGGAGGAATGAGGCTAATCCTGATGTCTGCAAGGAATTCTTCAGATGCCTTGCTATTTGCCATACTGTACTTCCCGAAGGTGAAGAGTCCCCTGAGAAGATCAGATATCAAGCTGCATCACCTGATGAGGAAGCTTTGGTTATTGCTGCGAAGCACTTTGGTTTCTTCTTCTACAGACGCACACCTACAACGATATATGTTCGTGAATCTCATGTTCAGAAGATGGGCCAAATTCAAGATGTGTCTTATGAGATTTTAAATGTGCTTGAGTTTAATAGTACAAGGAAACGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGGCTTTTACTATACTGTAAGGGTGCTGATACTGTAATCTATGAAAGACTCGCTGATGGTAATAATGATATCAAGAAAGTGACTAGGAATCATTTGGAACAATTTGGATCTGCTGGACTACGTACATTATGCCTGGCCTACAAAGAATTGCATCCTGATGTCTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTACATGATCGTGAAAAGAAATTAGACGAGGTGGCAGAACTTATTGAGAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGCATAGAGACTCTCCAAAGAGCTGGTATTAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCAATAAACATAGCGTATGCATGCAGTTTAATAAACAATGAGATGAAGCAATTTGTTATCAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGATAGGGGTGACCAAGTGGAAATTGCACGATTTATTAAAGAAGAAGTGAAAAAAGAGCTGAAGAAGTGTCTTGAGGAAGCAGAGAGCTATTTTCATACTCTATCTGGACCAAAATTAGCACTTGTGATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTAAGAGTGATGCTGCTGAATCTAAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGAGTTTCTCCTCTACAAAAAGCACAGGTCACAAGTATGGTCAAGAAAGGTGCACGAAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGATGGAGGGAATGCAAGCTGTGATGGCTAGCGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGTCATATCTGCGAATATGCAAGGTGGTGTTATACTTTTTTTACAAGAATCTCACGTTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGATTTTCTGGTCAGAGATTTTATGATGATTGGTTTCAGTCATTATTTAATGTTATCTTTACAGCACTGCCAGTGATCATTGTTGGACTATTTGACAAGGATGTTAGTGCATCACTATCAAAGAAATATCCTGAACTATACATGGAGGGAATAAGAAATGTCTTCTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTGTATACCAGTCTCTAATATTCTACTTTTTTGTCAGTTCGTCAAGTTTAAGTGCTAAAAACTCAGCAGGAAAGATATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTGTTGTAATAACCGTCAACTTGCGACTATTTATGATTTGTAATTCGATCACAAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCCTGGTTTATTTTTATTTTTATATACTCAGGGATTACCACTCCTTATGATCGACAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACATTCTATTTCTACCTCACACTAGTTCTTGTTCCTGTTGCTGCTCTTTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTTCCCTATGATTATCAGATTATTCAAGAAATGCATAGACATGAGCTTGATAACACTGGTAGGGCACAGCTGCTAGAGATCGGGAACCAGCTTACACCAGCTGAGGCAAGGAGCTATGCAATATCTCAACTCCCACGTGAGCTATCAAAGCACACCGGGTTTGCTTTTGATTCACCTGGGTACGAATCCTTTTTTGCTGCACAGCTTGGTGTTTATGCCCCACCAAAGGCATGGGATGTTGCAAGACGAGCTAGCATGAAATCACGGCCAAAGATTGGGCATAAAAAGTAA 3522 0.3969 MDEDKPGKQNDAAVLPWPLETRGVIGKETGGATIPESNDPPCDPPGHYHPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMSINNNMIDVLQDQKWESMPWKKLQVGDIVKVKQDGFFPADLLFMASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVECEQPNNSLYTFTGNLITQKQTLSLNPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFGTLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMVKFIQSTQFINKDLCMYHKETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGETEIERGIAERNGMKIEENRSPNAAQERGFNFDDARLMRGAWRNEANPDVCKEFFRCLAICHTVLPEGEESPEKIRYQAASPDEEALVIAAKHFGFFFYRRTPTTIYVRESHVQKMGQIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLLLYCKGADTVIYERLADGNNDIKKVTRNHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLHDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACSLINNEMKQFVISSETDAIREVEDRGDQVEIARFIKEEVKKELKKCLEEAESYFHTLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGARKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLFNVIFTALPVIIVGLFDKDVSASLSKKYPELYMEGIRNVFFKWRVVAIWAFFSVYQSLIFYFFVSSSSLSAKNSAGKIFGLWDVSTMAFTCVVITVNLRLFMICNSITRWHYISVGGSILAWFIFIFIYSGITTPYDRQENIYFVIYVLMSTFYFYLTLVLVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRHELDNTGRAQLLEIGNQLTPAEARSYAISQLPRELSKHTGFAFDSPGYESFFAAQLGVYAPPKAWDVARRASMKSRPKIGHKK 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3818g00001 1173 Gene3D - 634 841 IPR023214 -
Gabi3818g00001 1173 CDD P-type_ATPase_APLT_Dnf-like 69 961 - -
Gabi3818g00001 1173 ProSitePatterns E1-E2 ATPases phosphorylation site. 372 378 IPR018303 -
Gabi3818g00001 1173 PRINTS P-type cation-transporting ATPase superfamily signature 370 384 - -
Gabi3818g00001 1173 PRINTS P-type cation-transporting ATPase superfamily signature 801 820 - -
Gabi3818g00001 1173 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1079 IPR023298 -
Gabi3818g00001 1173 NCBIfam phospholipid-translocating P-type ATPase 49 1087 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi3818g00001 1173 SFLD p-type atpase 352 852 IPR044492 -
Gabi3818g00001 1173 SUPERFAMILY HAD-like 365 857 IPR036412 -
Gabi3818g00001 1173 FunFam Phospholipid-transporting ATPase IC 367 379 - -
Gabi3818g00001 1173 Gene3D - 499 633 IPR023299 GO:0000166
Gabi3818g00001 1173 FunFam Phospholipid-transporting ATPase 478 633 - -
Gabi3818g00001 1173 Pfam Cation transport ATPase (P-type) 465 561 - -
Gabi3818g00001 1173 SUPERFAMILY Calcium ATPase, transduction domain A 87 231 IPR008250 -
Gabi3818g00001 1173 MobiDBLite consensus disorder prediction 27 48 - -
Gabi3818g00001 1173 FunFam Phospholipid-transporting ATPase 66 235 - -
Gabi3818g00001 1173 FunFam Phospholipid-transporting ATPase 634 841 - -
Gabi3818g00001 1173 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 49 1128 - -
Gabi3818g00001 1173 Pfam E1-E2 ATPase 87 327 - -
Gabi3818g00001 1173 Pfam Phospholipid-translocating P-type ATPase C-terminal 829 1079 IPR032630 -
Gabi3818g00001 1173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 376 648 IPR023299 GO:0000166
Gabi3818g00001 1173 SFLD C1.7: P-type atpase like 352 852 - -
Gabi3818g00001 1173 Gene3D - 70 235 - -
Gabi3818g00001 1173 NCBIfam HAD-IC family P-type ATPase 774 880 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3818g00001 Gabi-Chr3818 1511 48465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3818g00001 50 1172 Primary Pumps ATPases AT1G59820 80.071 0.0 1927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3818g00001 K14802 - gmx:100815547 2098.17