Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3811g00003 ATGACTGGCAAAGAAATCTTCTATAAGATGAAGGAAAAGGTTTTGGGCTCATCTGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGCATATTACTCATGGCTTTCACTTGGTGAAGGGAAGATCAGATCATGCCATGGAAGACTATGTTGTTGCTCAATTTAAGCAAGTTGAAAACAATGAGTTGGGTTTATTTGCAATATTTGATGGCCACTCGGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGATTTCTGGACAGAACCAGATAATGCTGTCAAGAGAGCATATATTATAACCGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACAGCTGTTACAGCAATATTGATCAATTGTCAGACACTAGTAGTGGCCAATATTGGGGATTCTAGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTGTCAGTGGATCATGAACCAACCACAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGATGTTCCTCGGGTTGATGGGCAGTTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTAAGCTCTGAACCGTATGTGACAGTGGAGACGATAGATGATGAGGCAGAGTTTGTCATATTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCCGTTGATGCTGTCAGAGATGTAAAGGATGCTCGGTCAGCAGCAAAGAACCTTACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCGTGCGTTGTTGTGAGATTTCATTGA 849 0.4181 MTGKEIFYKMKEKVLGSSDPDSGKGKSKMSKHITHGFHLVKGRSDHAMEDYVVAQFKQVENNELGLFAIFDGHSGHSVPDYLRSHLFDNILKEPDFWTEPDNAVKRAYIITDSTILEKSGELGRGGSTAVTAILINCQTLVVANIGDSRAVLCKNGVAKQLSVDHEPTTESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPYVTVETIDDEAEFVILASDGLWKVMSNQEAVDAVRDVKDARSAAKNLTEEARNRKSSDDISCVVVRFH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3811g00003 282 Gene3D - 16 282 IPR036457 -
Gabi3811g00003 282 CDD PP2Cc 35 281 IPR001932 -
Gabi3811g00003 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Gabi3811g00003 282 FunFam Probable protein phosphatase 2C 39 24 282 - -
Gabi3811g00003 282 Coils Coil 244 264 - -
Gabi3811g00003 282 SMART PP2C_4 29 279 IPR001932 -
Gabi3811g00003 282 SUPERFAMILY PP2C-like 30 282 IPR036457 -
Gabi3811g00003 282 PANTHER PROTEIN PHOSPHATASE 28 281 IPR015655 GO:0004722|GO:0006470
Gabi3811g00003 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3811g00003 Gabi-Chr3811 11393 15356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3811g00003 1 282 PP2C-type Phosphatase Gene Family AT3G15260 74.740 2.62e-162 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3811g00003 K17506 - gmx:100787942 497.664