Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3811g00002 ATGACTGGCAAAGAAATCTTCTATAAGATGAAGGTTTTGGGCTCATCTGATCCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGCATATTACTCATGGCTTTCACTTGGTGAAGGGAAGATCAGATCATGCCATGGAAGACTATGTTGTTGCTCAATTTAAGCAAGTTGAAAACAATGAGTTGGGTTTATTTGCAATATTTGATGGCCACTCGGGTCACAGTGTACCTGATTACTTGCGGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGATTTCTGGACAGAACCAGATAATGCTGTCAAGAGAGCATATATTATAACCGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACAGCTGTTACAGCAATATTGATCAATTGTCAGACACTAGTAGTGGCCAATATTGGGGATTCTAGGGCTGTCTTATGCAAGAATGGCGTGGCCAAACAACTGTCAGTGGATCATGAACCAACCACAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGATGTTCCTCGGGTTGATGGGCAGTTAGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTAAGCTCTGAACCGTATGTGACAGTGGAGACGATAGATGATGAGGCAGAGTTTGTCATATTAGCCAGTGATGGGTTATGGAAGGTAATGTCAAATCAAGAAGCCGTTGATGCTGTCAGAGATGTAAAGGATGCTCGGTCAGCAGCAAAGAACCTTACTGAAGAAGCACGTAACAGGAAAAGCTCAGATGATATCTCGTGCGTTGTTGTGAGATTTCATTGA 843 0.4187 MTGKEIFYKMKVLGSSDPDSGKGKSKMSKHITHGFHLVKGRSDHAMEDYVVAQFKQVENNELGLFAIFDGHSGHSVPDYLRSHLFDNILKEPDFWTEPDNAVKRAYIITDSTILEKSGELGRGGSTAVTAILINCQTLVVANIGDSRAVLCKNGVAKQLSVDHEPTTESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPYVTVETIDDEAEFVILASDGLWKVMSNQEAVDAVRDVKDARSAAKNLTEEARNRKSSDDISCVVVRFH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3811g00002 280 PANTHER PROTEIN PHOSPHATASE 26 279 IPR015655 GO:0004722|GO:0006470
Gabi3811g00002 280 Pfam Protein phosphatase 2C 43 272 IPR001932 -
Gabi3811g00002 280 Gene3D - 12 280 IPR036457 -
Gabi3811g00002 280 ProSiteProfiles PPM-type phosphatase domain profile. 32 279 IPR001932 -
Gabi3811g00002 280 CDD PP2Cc 33 279 IPR001932 -
Gabi3811g00002 280 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Gabi3811g00002 280 SMART PP2C_4 27 277 IPR001932 -
Gabi3811g00002 280 Coils Coil 242 262 - -
Gabi3811g00002 280 FunFam Probable protein phosphatase 2C 39 22 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3811g00002 Gabi-Chr3811 11393 15359 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3811g00002 1 280 PP2C-type Phosphatase Gene Family AT3G15260 74.048 3.25e-160 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3811g00002 K17506 - gmx:100787942 488.804