Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi380g00009 | ATGGGTGGTCGTCTATCGGAGTCGAAGTTGCTCAAAGACTTGGTTCTGTACGCGGCTAGCACAGCACTGAGTTGCTTGGTGTTGTTCGTGGGGCTCCGACAACTTGACCCGAACCGCGAGGCATCAAAGAAAGCCCTTCAGCACAAAAAGGATATATCCAAACGCCTCGGTCGTCCCCTCCTTCAAACAAACCCTTACGAGGATGTGATAGCCTGTGATGTTATTAATCCTGATGACATTGATGTTGAGTTTAACTCTATTGGGGGACTTGAAAGAATAAAGCAAGCTTTGATTGAGCTTGTGATTTTGCCTCTGAAAAGACCAGAGTTGTTTTCTCATGGAAAGCTTCTTGGACCACAAAAGGGGATTCTGTTGTATGGACCACCTGGTACTGGCAAGACCATGCTTGCCAAAGCTATTGCTAAAGAGTGTGGTGCTGTTTTTATTAATGTCAAGATATCAAACCTCATGAGCAAGTGGTTTGGTGATGCCCAGAAGCTTGTGGCTGCCGTTTTCAGCCTAGCTGATAAGCTCCAGCCTTCTATCATATTCATTGATGAAGTTGACAGTTTTTTGGGTCAACGTCGTACAACAGATCATGAGGCTTTGTTAAACATGAAAACTGAGTTTATGGCTTTATGGGATGGATTCACTACAGATCAGAATGCCCAAGTTATGGTACTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGGCGTCTTCCTCAAGCCTTTGAAATCGGAATTCCAGACCAAAGGGAGAGGGCTGACATATTGAAGGTTATATTGAAGGGCGAGAGGGTTGAAGAAAACATTGACTGTAACCATATAGCTGGCCTATGTGAGGGTTACACTGGTTCAGATCTATATGATCTCTGCAAGAAGGCTGCCTATTTTCCAGTTAGAGAACTGCTGGATGAAGAGGAGAAAGGGAAAAGATCTTATGCACCTAGACCATTGTCACAGTCAGATTTGGAGAGGGCCTTTGCCACTTCACGGAAGACAAAGATTGCTGCAAGTGAATACAGTGGATCAAGCACAGGGACACCAAGATGGACAGGGAACAGGGAATCAGGTGATTATGAGGTTCAAGCTGCAATAAGTGAACTCTCTAAGTTTGTGCTGTCTCACATGATTAACCGCCAACCAGATGCCGAGGATCTTTAA | 1179 | 0.447 | MGGRLSESKLLKDLVLYAASTALSCLVLFVGLRQLDPNREASKKALQHKKDISKRLGRPLLQTNPYEDVIACDVINPDDIDVEFNSIGGLERIKQALIELVILPLKRPELFSHGKLLGPQKGILLYGPPGTGKTMLAKAIAKECGAVFINVKISNLMSKWFGDAQKLVAAVFSLADKLQPSIIFIDEVDSFLGQRRTTDHEALLNMKTEFMALWDGFTTDQNAQVMVLAATNRPSELDEAILRRLPQAFEIGIPDQRERADILKVILKGERVEENIDCNHIAGLCEGYTGSDLYDLCKKAAYFPVRELLDEEEKGKRSYAPRPLSQSDLERAFATSRKTKIAASEYSGSSTGTPRWTGNRESGDYEVQAAISELSKFVLSHMINRQPDAEDL | 392 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi380g00009 | 392 | FunFam | ATPase family AAA domain-containing protein 1 | 81 | 258 | - | - | |
Gabi380g00009 | 392 | PANTHER | AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED | 31 | 351 | - | - | |
Gabi380g00009 | 392 | MobiDBLite | consensus disorder prediction | 343 | 362 | - | - | |
Gabi380g00009 | 392 | Pfam | AAA+ lid domain | 275 | 311 | IPR041569 | - | |
Gabi380g00009 | 392 | Gene3D | - | 81 | 339 | IPR027417 | - | |
Gabi380g00009 | 392 | SMART | AAA_5 | 119 | 255 | IPR003593 | GO:0016887 | |
Gabi380g00009 | 392 | ProSitePatterns | AAA-protein family signature. | 225 | 244 | IPR003960 | GO:0005524|GO:0016887 | |
Gabi380g00009 | 392 | MobiDBLite | consensus disorder prediction | 343 | 358 | - | - | |
Gabi380g00009 | 392 | CDD | RecA-like_ATAD1 | 86 | 251 | - | - | |
Gabi380g00009 | 392 | Gene3D | - | 254 | 334 | - | - | |
Gabi380g00009 | 392 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - | |
Gabi380g00009 | 392 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 82 | 315 | IPR027417 | - | |
Gabi380g00009 | 392 | Pfam | ATPase family associated with various cellular activities (AAA) | 123 | 252 | IPR003959 | GO:0005524|GO:0016887 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi380g00009 | Gabi-Chr380 | 92572 | 95918 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi380g00009 | 82 | 317 | Calmodulin-binding Proteins | AT3G56690 | 35.537 | 7.35e-38 | 143 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi380g00009 | K22530 | - | gmx:100791694 | 665.225 |