Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3808g00002 ATGGCACCTTCATTCGACATAAGTACTCACACGGTATGTGTCATGGACGCTTCGGGCCAATTGGGCTTTAACTTGGTACAGAGACTCCTCCAAAGGGGCTACACCGTCCACGCCTCCGTTCAAAAATATGGTGAAGAAGATTTATTCAATGGGATTTCTGCTGAGACCGATAAGCTTAAGGTTTTTCGATCAGACCCATTTGATTACCATAGCATTATTGATGCACTCAGAGGCTGCTCTGGCTTGTTTTACACATTTGAGCCTCCCCTTGACCAACCCAATTATGATGAATACATGGATGACGTGGAGGTGAGAGCTGCACACAACGTGCTCGAAGCTTGTGCTCAGACAGAAACATTAGATAAAGTGGTTTTCACATCCTCAGCAACCGCAGTGGTTTGGAGGGAGGATCGCAAGACCATGGAATTGGGTTTAGATGAGAGACATTGGAGTGATGTTAATTTATGTCGTAAATTCAAGTTATGGCATGGGATGTCAAAAGCAATGGCAGAAAAGACAGCGTGGGCCTTGGCAATGGACAGAGGAGTGAATATGATTTCAATCAACGCAGGCTTGTTGATGGGTCATGATCTCTCCATCCAGAACCCTTACTTGAGAGGAGCTGCTGAGATGTACGAGGACGGGGTGTTCGTGACCGTTGATTTGGGTTTCTTGGTGGATGCCCACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCACATTATCAATACCCACGACGACGCCGTTCAGCTCGCCCGCAAGTTGACGCCTGCTGCTTCTTCTTCCTTGCCTCAAAGCGGTGACCATGGTAAAAGTTTTATCGAACAGAGAATAAGCAACAAGAAGTTGAACAAATTGATGGTGGACTTTGAGGCTTGA 900 0.4633 MAPSFDISTHTVCVMDASGQLGFNLVQRLLQRGYTVHASVQKYGEEDLFNGISAETDKLKVFRSDPFDYHSIIDALRGCSGLFYTFEPPLDQPNYDEYMDDVEVRAAHNVLEACAQTETLDKVVFTSSATAVVWREDRKTMELGLDERHWSDVNLCRKFKLWHGMSKAMAEKTAWALAMDRGVNMISINAGLLMGHDLSIQNPYLRGAAEMYEDGVFVTVDLGFLVDAHICVYEDVSSYGRYLCFNHIINTHDDAVQLARKLTPAASSSLPQSGDHGKSFIEQRISNKKLNKLMVDFEA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3808g00002 299 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 173 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gabi3808g00002 299 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 299 - -
Gabi3808g00002 299 Gene3D - 4 299 - -
Gabi3808g00002 299 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 290 - -
Gabi3808g00002 299 CDD FR_SDR_e 12 295 - -
Gabi3808g00002 299 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 265 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3808g00002 Gabi-Chr3808 36158 39044 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3808g00002 11 297 Monolignol Biosynthesis Gene Families AT5G58490 31.818 6.85e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3808g00002 - - gmx:100793329 564.303