Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3807g00030 ATGAAACTCGAAAATGGTTTACTGTTGTTGTTTCTGTTGCTGGAGTATGTTTGTTTCAATGTGGAATCCAAGTGTATGAAGGGGTGTGATTTAGCTTTAGCTTCCTACTATGTCATGCCTACAGTTTCACTCAAAAACAATATAACGCGCTTTATGCAATCAAATATTGTGTCAAATTCTGATGTTATAACCAGCTACAATAAAGACAAAATATTCAATGGTGAAGCGCTATCCCTTGAGAGACTCAATATTCCATTCCCATGTGACTGTATAGATGGTGAATTTCTGGGGCATGTGTTTGAGTACTCATATGCTGCAGGAGACACCTATGATTTGATTGCCAAAATGTATTATGCCAATCTTACAACAGTTGAGCTTTTGCAAAGGTTCAACAGCTATGACCCAAATGATATAACCCTTAATGCCAAGCTTAATGTCACTGTCAATTGTTCTTGTGGGAACACCCAAATTTCGGAGGATTATGGGCTGTTTATTACATATCCGCTCAGGCCTGGGGATAATATGCAAAATATTGCAAACGAAACTAATCTTGAAGCAGAGTTGCTCCAGAATTACAATCCTGGTGTCAATTTCAGCAAAGAGAGTGGGATTGTTTTCATTCCAGGAAGAGATAAAAATGGAGTCTATGTTCCCTTGTATCCCAGAACAGGTCTAAATTGGGGTATTGCTGTTGGAGTACCTATAGCAGGAATATGCGGGCTTCTATTATTAGTAATTTGTATATATGTTAGATACTTCCAGAAAAAGGATGGAGAGAAAGCTAAATTGCCTACAGAATATTCTATGGCGCTTTCAACTCAAGATGGTACTGCCTCTAGTAGTGCAGACTATGAAACTTCAGGATCCACTGGGCCTGGTTCTGCTAGTGCTGCTGGCCTTACAGGGATTATGGTGGTAAAATCAATGGAGTTCTCGTATCAAGAACTAGCCAAGGCTACAAATAACTTTAGCTTGGATAATAAAATTGGTCAAGGTGGATTTGGAGTCGTCTATTATGCAGAACTGAGAGGCGAGAAAACAGCAATTAAGAAGATGGACGTACAAGCATCAACAGAATTTCTCTGTGAGTTGAAGGTCTTAACACACGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGCGTGGAGGGATCTCTTTTCCTTGTATATGAATATATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGTAGAGACCCATTAACATGGTCTACCCGAGTACAAATTGCTCTAGATTCAGCGAGAGGCCTTGAATATATTCAGGAGCACACTGTGCCTGTGTATATCCATCGTGATGTAAAGTCTGCAAATATATTAATAGACAAAAACTTCCGTGGAAAGGTTGCAGATTTTGGTTTGACCAAACTTATTGAAGTTGGAGGCTCCACACTTCACACTCGTCTTGTGGGAACATTTGGATACATGCCACCAGAATATGCTCAATATGGTGTCATTTCTCCAAAAATTGATGTATATGCTTTTGGAGTTGTTCTTTATGAACTTATATCTGCAAAAAATGCTGTTCTGAAGACAGGTGAATCCGTTGCTGAATCAAAGGGTCTTGTAACTTTGTTTGAAGAAGCTCTTAATCAGAGTGATCCTTTAGATGGTCTTCGCAAACTGGTAGATCCTAGGCTTGAAGAAAACTATCCAATTGATTCAGTTCTTAAGATTGCCCAACTTGGAAGAGCTTGTACAGGAGATAATCCACTACTACGCCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCTAATGAGGATTGCGAGGATGACACTTCCTACGAGAATCAAACTCTCATAAATCTACTTTCAGTTAGATGA 1866 0.3923 MKLENGLLLLFLLLEYVCFNVESKCMKGCDLALASYYVMPTVSLKNNITRFMQSNIVSNSDVITSYNKDKIFNGEALSLERLNIPFPCDCIDGEFLGHVFEYSYAAGDTYDLIAKMYYANLTTVELLQRFNSYDPNDITLNAKLNVTVNCSCGNTQISEDYGLFITYPLRPGDNMQNIANETNLEAELLQNYNPGVNFSKESGIVFIPGRDKNGVYVPLYPRTGLNWGIAVGVPIAGICGLLLLVICIYVRYFQKKDGEKAKLPTEYSMALSTQDGTASSSADYETSGSTGPGSASAAGLTGIMVVKSMEFSYQELAKATNNFSLDNKIGQGGFGVVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGRDPLTWSTRVQIALDSARGLEYIQEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLIEVGGSTLHTRLVGTFGYMPPEYAQYGVISPKIDVYAFGVVLYELISAKNAVLKTGESVAESKGLVTLFEEALNQSDPLDGLRKLVDPRLEENYPIDSVLKIAQLGRACTGDNPLLRPSMRSIVVALMTLSSPNEDCEDDTSYENQTLINLLSVR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3807g00030 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Gabi3807g00030 621 FunFam PTI1-like tyrosine-protein kinase 3 394 607 - -
Gabi3807g00030 621 Gene3D Transferase(Phosphotransferase) domain 1 394 617 - -
Gabi3807g00030 621 SUPERFAMILY Protein kinase-like (PK-like) 304 593 IPR011009 -
Gabi3807g00030 621 Pfam Protein tyrosine and serine/threonine kinase 324 535 IPR001245 GO:0004672|GO:0006468
Gabi3807g00030 621 FunFam LysM receptor kinase 2 302 393 - -
Gabi3807g00030 621 SMART serkin_6 323 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00030 621 Gene3D Phosphorylase Kinase; domain 1 308 393 - -
Gabi3807g00030 621 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 8 604 IPR044812 GO:0019199|GO:0045087
Gabi3807g00030 621 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Gabi3807g00030 621 MobiDBLite consensus disorder prediction 274 296 - -
Gabi3807g00030 621 ProSiteProfiles Protein kinase domain profile. 323 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3807g00030 Gabi-Chr3807 321408 325058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3807g00030 1 621 Receptor kinase-like Gene Family AT3G21630 55.222 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gabi3807g00030 PK_Tyr_Ser-Thr 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3807g00030 - K13429 gmx:100792559 986.867