Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3807g00029 ATGAAACCAAGATTCAGATTTTCACTTTTCTTCTTCTTGTTGGCCTCTATATCATTCAGTGCTGAATCAAAGTGTAGCAAGGGTTGTGATTTAGCTCTAGCTTCCTACTACCTATGGAGTGGTTCTAACCTCACATATGTTTCAAAGATTATGAAATCCAAGGTTCTTTCCAAGCCTGAAGATATTTTAAGTTATAACAAAGACAAGTTGACCAACAATGATTCCATCAGGGTTAACATTCCGTTCCCTTGTGATTGCATCAATGGTGAGTTTCTGGGTCACACATTTCTGTATACGTTTCAGCCAGAGGATACTTATACATCAGTTGCAAGCAAGAGTTTTTCTAATTTGACCACCGATGAGTGCATGCAAAGGTCAAACATTTATCCACCTTACAATATTCCTGATTTTGAATTGCTTAATGTCACTGTTAACTGTTCCTGTGGGAACAGCAAGGTTTCCATGGATTATGGGTTGTTCATCACATACCCACTTAGACCAGAGGACACTTTGCAGTCAATTACAAACCAGACGAACCTTGAGGCTGAGTTGTTGCAGAAGTACAACCCTGGTGTGGATTTCAGCCAAGGAAGTGGTCTGGTTTATATTCCAGGGAAAGACCAAAATGGTAACTATGTGCCCCTTCACCTTAGCACCGGAGGTTTAGCAGGTGGGACTATTGCTGGAATATCTGTCGGAGTAGTAGCAGCACTTTTATTATTGGCACTTTGTGTGTATATTTACTACCACAAGAAAAAGGCATGGGAGAAAAATTTGATCTTGGATGATTCCACAGTGAACTCTGCTCCAGTTATTCAAGATTCTGGTGATCCTGCTGCCATTGGTGGTACTGGAGTCACAGGGATTAAGGTGGACAAATCACCAGAGTTTTCATATGAAGAACTAGCCAATGCCACAAATAACTTCAGTATAGCTAATAAAATTGGTCAAGGTGGTTATGGGGTAGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCTGCTATCAAGAAGATGAAGATGCAAGCATCGAAAGAATTTCTCGCTGAATTGAAAGTCTTGGCTCATGTTCATCACTTGAACTTGGTACGCTTGATTGGATATTGCGTCGAGGGTTCTCTCTTCCTTGTCTATGAATACATTGACAATGGAAACTTAAGCCAAAACCTACGTGGTTTAGAAAGAGAACCTTTGCCATGGTCTACAAGGGTGCAAATAGCTCTGGATTCAGCAAGAGGTCTTGAATACATTCACGAGCACACTGTTCCTGTATATGTCCATCGTGACATAAAATCAGAAAATATTTTATTAGACAGAAGCTTCTGTGGCAAGGTTGCAGATTTTGGATTATCCAAGCTGGCTGACGTTGAAAATTCAATCGTGGCGGGTACATTTGGTTACATGCCACCAGAATATGCGCGTCGCCATGTTTCTTCTCCCAAAGTAGATGTCTTTGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCAAGGATGGTGCTGAATCAAAGGGCCTTGTAGCTTTGTTTGATGAAGTTCTTGGTCATCAGTCAGATGGTCTTAAAAGTCTGGTGGATCCTAGGCTTGGAGATAATTACTCGATTGATTCAGTTCAAAAGGTGGCACAACTAGCCAAAGCATGTACAGAGAGAGATCCGCGACGACGTCCAAGTATGAGATATGTTGTGGTTGCTCTTATGACACTTAATTCTACAACTGAGGATTGGGATATTGCATCCCTCTACGAAAATCCAGCTCTTGTAAATCTAATGTCTGGAAAATAA 1797 0.4096 MKPRFRFSLFFFLLASISFSAESKCSKGCDLALASYYLWSGSNLTYVSKIMKSKVLSKPEDILSYNKDKLTNNDSIRVNIPFPCDCINGEFLGHTFLYTFQPEDTYTSVASKSFSNLTTDECMQRSNIYPPYNIPDFELLNVTVNCSCGNSKVSMDYGLFITYPLRPEDTLQSITNQTNLEAELLQKYNPGVDFSQGSGLVYIPGKDQNGNYVPLHLSTGGLAGGTIAGISVGVVAALLLLALCVYIYYHKKKAWEKNLILDDSTVNSAPVIQDSGDPAAIGGTGVTGIKVDKSPEFSYEELANATNNFSIANKIGQGGYGVVYYAELRGEKAAIKKMKMQASKEFLAELKVLAHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLSQNLRGLEREPLPWSTRVQIALDSARGLEYIHEHTVPVYVHRDIKSENILLDRSFCGKVADFGLSKLADVENSIVAGTFGYMPPEYARRHVSSPKVDVFAFGVVLYELISAKEAVIKDGAESKGLVALFDEVLGHQSDGLKSLVDPRLGDNYSIDSVQKVAQLAKACTERDPRRRPSMRYVVVALMTLNSTTEDWDIASLYENPALVNLMSGK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3807g00029 598 SUPERFAMILY Protein kinase-like (PK-like) 291 570 IPR011009 -
Gabi3807g00029 598 FunFam LysM receptor kinase 2 288 379 - -
Gabi3807g00029 598 FunFam PTI1-like tyrosine-protein kinase 3 380 584 - -
Gabi3807g00029 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Gabi3807g00029 598 Pfam Protein tyrosine and serine/threonine kinase 311 568 IPR001245 GO:0004672|GO:0006468
Gabi3807g00029 598 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Gabi3807g00029 598 ProSiteProfiles Protein kinase domain profile. 309 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00029 598 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 583 IPR044812 GO:0019199|GO:0045087
Gabi3807g00029 598 Coils Coil 325 345 - -
Gabi3807g00029 598 SMART serkin_6 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00029 598 Gene3D Phosphorylase Kinase; domain 1 285 379 - -
Gabi3807g00029 598 Gene3D Transferase(Phosphotransferase) domain 1 380 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3807g00029 Gabi-Chr3807 299520 304344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3807g00029 1 598 Receptor kinase-like Gene Family AT3G21630 54.808 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gabi3807g00029 PK_Tyr_Ser-Thr 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3807g00029 - K13429 gmx:100803042 806.208