Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3807g00028 ATGCTGCCCCTTATATCATATATTATCCATAATACATACACCCATTTGCGTATTCATCATACCCAGATTCTTGTTTTGTGTTCCTCTTAATAGGTTTCACAAGCTTTTCTACTCTACCCAATGGAACCCAGATTCAGATTATCACTTTTCATCTTGTTGCTGGCCTCTATATCCTTCACTGCAGAATCAGGATGTAGCAAGGGTTGTGATTTAGCTTTAGCTTCATACTATCTTTGGGATGGTTCTAACCTCACATATATTTCAAAGATTATGTATTCCCAGGTTCTTTCTAAACCTGAAGATATTGTCCCCTATAACAAAGACATAAAAAGCAAAGACTCTGTCCAATCCTTTACCAGAGTGAACGTTCCATTCCCTTGTGATTGCATCAATGGTGAGTTTCTGGGTCACACATTTCTGTACACGTTTCAGCCAGATGATACTTACACATCAGTTGCAAGCAAGCGTTTTTCTGATTTGACCACCGATGAGTGCATGCAAAGGTCAAACATTTATCCACCAGACAATATTCCTGATTTTGAATTGCTTAATGTCACTGTTAACTGTTCCTGTGGGAACAGCGAGGTTTCCATGGATTATGGATTGTTCATCACATACCCACTTAGACCTGAGGACACTTTGCATTCAATTGCAAACCAGACCAACCTTGAGCCCGAGTTGCTGCAGAAGTACAACCCGGGTGTAAATTTTAACCAAGGGAAGGGTCTGGTTTATATTCCAGGGAAAGACCAAAATGGTAGCTATGTGCCCCTTCGCCTAAGCACTGGAGGTCTAGCGCGTGGGTTCATCGCTGGAATATCTGTTGGAGTAGCAGTAGCAGGACTTCTGCTATTGGCATTTTGTGTGTATTTTACATATTACCGAAGAAAGAAGGTATTGAAGAAAAAGTTGCTCTCTGTAGAAAAGAGCGTGAAGTCTGTTCGAGTTAAGAATGATAAAGCCTCTGGTAATGCTAAAGACGAAGCTGCAGATTCTGGTGGTCCTGCTGCTGCAGGTGGTACTAACACCATAGGCATTAGGGTGGACAAATCGGCTGAGTTTTCATACAAAGAACTAGCCAATGCCACAAATAACTTCAGCATGGCTAACAAAATTGGTCAAGGTGGTTTTGGGGTAGTCTACTATGCTGAGCTGAATGGCGAGAAAGCTGCAATAAAAAAGATGGACATGAAAGCATCGAAAGAATTTCTTGCTGAACTGAAAGTGTTGACACATGTTCATCACTTGAACCTGGTACGCTTGATTGGATATTGCATTGAGGGTTCCCTTTTCCTTGTCTATGAATGCATTGAAAATGGAAACTTAAGCCAACATCTACATAATTCAGATGTAGGACCTTTGCCATGGTCTACACGAGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCACGAACATACAGTGCCTGTATATATCCATCGTGACATAAAGTCAGAAAATATTTTATTAGACAGAAACTTCCGTGGAAAGGTTGCAGATTTTGGATTAACCAAGCTCATTGATGTTGGAACTTCATCATTTCCCACTGTTAACATGGCTGGCACATTTGGTTACATGCCACCAGAATATGTGTATGGCAGTGTTTCTCCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTTTATGAATTAATTTCTGCTAAAAAAGCTGTGATCAAGGATGGTGTGTCTGGTGCTGAATTGAAGGGCCTTGTAGCTTTGTTTGATGAAGTTTTTGATGAGCCAGATCCTACAGAAGGTCTTAAAAAACTGGTAGATCCTAGGCTTGGAGATAATTGCTCAATTGATTCAGTTCGCAAGATGGCACAACTTGCCAAAGCGTGTACCGAGAGAGAGCCACAACAACGTCCAAATATGAGCTCTGTTGTGGTTGCTCTTACAACACTTACTTCAGCTACTGAGGATTGGGATTTTGCTTCCATCTACAAAAATCCTGCTCTTGTAAATCTAATGTCTGGAAGATAG 1995 0.4085 MLPLISYIIHNTYTHLRIHHTQILVLCSSXXVSQAFLLYPMEPRFRLSLFILLLASISFTAESGCSKGCDLALASYYLWDGSNLTYISKIMYSQVLSKPEDIVPYNKDIKSKDSVQSFTRVNVPFPCDCINGEFLGHTFLYTFQPDDTYTSVASKRFSDLTTDECMQRSNIYPPDNIPDFELLNVTVNCSCGNSEVSMDYGLFITYPLRPEDTLHSIANQTNLEPELLQKYNPGVNFNQGKGLVYIPGKDQNGSYVPLRLSTGGLARGFIAGISVGVAVAGLLLLAFCVYFTYYRRKKVLKKKLLSVEKSVKSVRVKNDKASGNAKDEAADSGGPAAAGGTNTIGIRVDKSAEFSYKELANATNNFSMANKIGQGGFGVVYYAELNGEKAAIKKMDMKASKEFLAELKVLTHVHHLNLVRLIGYCIEGSLFLVYECIENGNLSQHLHNSDVGPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSENILLDRNFRGKVADFGLTKLIDVGTSSFPTVNMAGTFGYMPPEYVYGSVSPKIDVYAFGVVLYELISAKKAVIKDGVSGAELKGLVALFDEVFDEPDPTEGLKKLVDPRLGDNCSIDSVRKMAQLAKACTEREPQQRPNMSSVVVALTTLTSATEDWDFASIYKNPALVNLMSGR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3807g00028 664 Gene3D Transferase(Phosphotransferase) domain 1 437 653 - -
Gabi3807g00028 664 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Gabi3807g00028 664 SMART serkin_6 366 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00028 664 Pfam Protein tyrosine and serine/threonine kinase 368 635 IPR001245 GO:0004672|GO:0006468
Gabi3807g00028 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Gabi3807g00028 664 Gene3D Phosphorylase Kinase; domain 1 340 436 - -
Gabi3807g00028 664 FunFam LysM receptor kinase 2 345 436 - -
Gabi3807g00028 664 FunFam PTI1-like tyrosine-protein kinase 3 437 650 - -
Gabi3807g00028 664 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 47 649 IPR044812 GO:0019199|GO:0045087
Gabi3807g00028 664 ProSiteProfiles Protein kinase domain profile. 366 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00028 664 SUPERFAMILY Protein kinase-like (PK-like) 348 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3807g00028 Gabi-Chr3807 284786 297454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3807g00028 44 664 Receptor kinase-like Gene Family AT3G21630 57.528 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gabi3807g00028 PK_Tyr_Ser-Thr 4.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3807g00028 - K13429 gmx:100803042 879.396