Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3807g00010 ATGATGGCCACAATCATGTGCTCCACTACCATTGTTCTCTTGTTGTTGAGTCTCGCCATCACAGAAACACAAGGTCAACAAGAGTACGTCAACAACAAGCAGCTAGATTGTGAAAACCAATACAACACAACCTACGGCAATGTCTGCAACAGCGTGAGTTCATGCCAATCATATCTCACATTCAAATCATCCTCTCCAAACTACAACACACCCTCTTCCATATCTTACCTCCTCAACGCCACACCCTCACTCATCGCTGAATCCAACAACATCACAGACGTTGACCTCATCCCCACCGACAACATGGTCGTCGTTCCGGTCAACTGCTCCTGTTCCGGTAATCTCTACCAACACAACGCGACCTACACCTTGAAGGTTCTGGGAGAAACCTACTTCACCATCGCCAACAACACCTACGAGGCTCTCACAACTTGTCAGGCCCTTCAGGCTCAGAATCCCGCCGGTGAACGGAACCTCACTGTTGGTCTCCAACTGCACGTGCCACTCAGGTGCGCTTGTCCAACGAAGAAACAGCTTGATGCTGGCTTCAAGTACTTGCTCACTTACCTTGTCTCTGAAGGCGAATCAATTTCTTCCATTGCTGACATCTTTGGTGTCGACGAACAAAGCATTTTGGATGCAAACGAGATTTCTTCTACTTCCGTTATTTTCTTCTTCACACCCATTTTGGTTCCTCTCAAACACGAGCCACCGACCAAGATACAAACAGCGGTGTCTCCAACGGAATCTCCGCCGCCGCCGCCAACAACAACAACTCCGGCAGGGAATGGAGGTTCAGGCTCTTCCACGAAATGGGTTGTTGTTGGAGTCACGGTTGGAGTTGCTTTGTCGCTTCTTGTGATTCTCCTTGTGTTTTTCCTCTGTTTCTATCGCCGCCGCCGAACACCGGCGGCGGCGGCGGAGGCCAAGCCTTTCTCGGCTTCTGCCACCAGCGAAGAAACCAAGAAGCTTTCGCATGCAACCCCAACAACTGAATCCTTCTCTCTTTCTTATGAAGGGATTCGCTATGCAATCGAGTCGTTGACCGTGTACAAGTTTGAGGACTTGCAGAAAGCCACCGGGTTCTTCGGTGAAGATAACAGGATAAAGGGTTCTGTTTATAGAGCTTCTTTCAAGGGTGATGCTGCTGCTGTCAAGGTTCTCAAAGGGGATGTCTCTGCTGAGATCAACATTCTAAAGAGGATCAACCACACCAACATTATAAGGTTGTCTGGTTTTTGTGTGCACAAAGGTGACACCTATCTTGTCTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCACGCTGAGAAGAAGTACCAGAATTCCAGGACTCTGAGTTGGATGCACAGAGTTCAGATTGCTCATGATGTGGCTGATGCACTCAATTACCTTCATAATTATACCAATCCTCCTCATGTTCATAAGAATTTGAAAAGTGGTAATATTCTTTTGGATGGCAATTTTAGAGCTAAAGTTTCAGATTTTGGATTAGCAAGAGCAGTGGAGGATCAAGGGTTCCAATTAACAAGGCATGTGGTGGGGACTCAAGGTTACATGCCACCTGAGTATATTGAGAATGGTGTGATTACTCCAAAGATGGATGTTTTTGCATTTGGGGTTGTGATTTTGGAGCTTCTTTCAGGAAGAGAAGCCACTGGTGGAGACAAGAATGGATCAGGGGAACAGATGCTGTCAGCATATGTGAGTCAGGTGCTGGAAGGAGACAATGTCAGAGACAAGCTTCGTGGTTTCATGGATCCAACTTTGAGGGATGAATACCCTTTGGATCTGGCTTACTCCATGGCAGAGATTGCCAAACACTGTGTTGCTCGTGACCTTAATTCACGACCAAACATTTCTGAGGTTTTCACAACTCTGTCCAAGATTCAATCCTCTACACTGGATTGGGATCCATCTGATGAGCTTGAACGGTCCAGATCTTATAGCCAAGTCTCTGATAGCAGATAG 1977 0.4679 MMATIMCSTTIVLLLLSLAITETQGQQEYVNNKQLDCENQYNTTYGNVCNSVSSCQSYLTFKSSSPNYNTPSSISYLLNATPSLIAESNNITDVDLIPTDNMVVVPVNCSCSGNLYQHNATYTLKVLGETYFTIANNTYEALTTCQALQAQNPAGERNLTVGLQLHVPLRCACPTKKQLDAGFKYLLTYLVSEGESISSIADIFGVDEQSILDANEISSTSVIFFFTPILVPLKHEPPTKIQTAVSPTESPPPPPTTTTPAGNGGSGSSTKWVVVGVTVGVALSLLVILLVFFLCFYRRRRTPAAAAEAKPFSASATSEETKKLSHATPTTESFSLSYEGIRYAIESLTVYKFEDLQKATGFFGEDNRIKGSVYRASFKGDAAAVKVLKGDVSAEINILKRINHTNIIRLSGFCVHKGDTYLVYEFAENDSLDDWLHAEKKYQNSRTLSWMHRVQIAHDVADALNYLHNYTNPPHVHKNLKSGNILLDGNFRAKVSDFGLARAVEDQGFQLTRHVVGTQGYMPPEYIENGVITPKMDVFAFGVVILELLSGREATGGDKNGSGEQMLSAYVSQVLEGDNVRDKLRGFMDPTLRDEYPLDLAYSMAEIAKHCVARDLNSRPNISEVFTTLSKIQSSTLDWDPSDELERSRSYSQVSDSR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3807g00010 658 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 642 - -
Gabi3807g00010 658 MobiDBLite consensus disorder prediction 241 267 - -
Gabi3807g00010 658 ProSiteProfiles LysM domain profile. 187 231 IPR018392 -
Gabi3807g00010 658 SUPERFAMILY LysM domain 187 232 IPR036779 -
Gabi3807g00010 658 SMART LysM_2 188 232 IPR018392 -
Gabi3807g00010 658 SMART LysM_2 58 106 IPR018392 -
Gabi3807g00010 658 ProSiteProfiles Protein kinase domain profile. 297 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00010 658 SUPERFAMILY Protein kinase-like (PK-like) 349 627 IPR011009 -
Gabi3807g00010 658 Gene3D Phosphorylase Kinase; domain 1 322 426 - -
Gabi3807g00010 658 MobiDBLite consensus disorder prediction 637 658 - -
Gabi3807g00010 658 Gene3D LysM domain 184 244 IPR036779 -
Gabi3807g00010 658 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Gabi3807g00010 658 MobiDBLite consensus disorder prediction 640 658 - -
Gabi3807g00010 658 FunFam PTI1-like tyrosine-protein kinase 3 427 643 - -
Gabi3807g00010 658 Pfam Protein kinase domain 390 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3807g00010 658 Pfam LysM domain 189 232 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3807g00010 Gabi-Chr3807 125116 127438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3807g00010 4 650 Receptor kinase-like Gene Family AT2G33580 53.754 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gabi3807g00010 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3807g00010 - - gmx:100818534 929.858