Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3807g00003 ATGGCATCATCCATCTTCAAAGTTTTTCTATCAACAATCATTCTTTGCACTTTCTTGAAGGAACACACTCATGCCCTTAGAAAGACCTACATTGTGTACCTGGGAGGACATACTCATGGTCCAAATCCTTTGCCTAGTGATCTTGAGTCAGCCACAAATTCCCATTATGATTTACTGGCTTCAGTCTTGGGAAGTCATGAGAAGGCCAAGGAAGCAGTTATGTACTCCTACAATAAACACATAAATGGCTTTGCTGCACTGCTTGAAGAGGAAGAGGCATCAGAGATTGCAAAAAACCCAAATGTGGTTTCAGTTTTCTTGAGCAAAGAGCATAAATTGCACACTACCAGGTCATGGGACTTTCTTGGACTGGAAAAATATGGTGGAATTCCTCCAAACTCTGCTTGGCAGAAGGCAGCATTTGGCGTAAATACAATCGTGGCTAATATAGATACAGGCGTTTGGCCCGAACACATGAGTTTCAACGACTATGGATACGGGCCCGTTCCATCGAGGTGGAATGGGAATGGGGTCTGTGAGATTGACCAATTTAATGGTTCAAACAAAAATTTCTGTAACAGGAAGCTGATTGGAGCAAGAATCTTCAGCAAAAATTACGAGGCACAATTTGGCAAACTTGATCCATTGAACCTTACTGCACGTGACTTTGTTGGCCATGGTACCCATACCCTGTCAACTGCTGCTGGTAATTTTGCTCCTGGTGCTACTATCTTCGGTAATGGAAATGGCACTGCAAAGGGTGGATCCCCAAGAGCTCGTGTTGCAACCTACAAAGTTTGCTGGTCTACACTTGATGCTGGTGGCTGTCATGAAGCTGACATTTTACAAGCATTTGATTATGCCATTTATGATGGTGTTGATGTCATCTCAGCCTCTGTGGGTGGTTCTACTCCCTATGCTGAAGCTTTGTTCACAGATGGCATTTCCATTGGGGCATTCCATGCAGTTGCTAGAAATATAGTGGTTGTTTGCTCAGCTGGGAATGATGGGCCAGCACCTAGAACTGTCTTAAATGTTGCACCTTGGTCCTTCACTGTTGCTGCTAGTACAATAGACAGGGATTTTCTCACCAACATTTCTTTTGGTAACAAGCATTACCTAAAGGGAGCTAGTCTTAATAGAGGCTTACCATCACGGAAATCTTATCCATTGATTCATTCTGTCGATGCTAAACTTCCTAATGCCACAATTCAAGATGCTCGTATTTGCAAGCCTGGAACACTTGATCCTACCAAAGTAAAGGGACAAATATTAATCTGCATTCGAGGTGACAAAACATCATCAGTTGCTGAGGGCCAAGAAGCTGCTCGTGCAGGCGCAGTGGGAGTATTTGTGATCAATGATGAGCAAAGTGGAAATACACTCCCAGCTGAGCCTCATATTATACCCGGTGCAAGTTTGGATGTCTATCAGGATGAAAATGCTGATGAAGGTGAATGGTTAAGAAAAGGAGGTTCCGACAAAAACAATAGCAGGAAACTTGCAGCTTTCATGCCTGCAGCAAGAACATATATAGGAATAAAGCCAGCTCCAACTGTGGCTGGATTCTCATCCAGGGGTCCCAGTGCCGTGCAACCATTGATACTCAAGCCTGACATAACTGGTCCTGGTGTGAACATACTAGCTGCTTATTCACTAGCCACAGGTCCATCTAATCTGCCATCAGATACACGCAGGGTTCCTTTCAATGTGCAACAGGGAACTTCTATGTCTTGCCCTCATGTTGCTGGGGTGGCTGGTCTTCTCAAAACACTTCATCCTGATTGGAGTCCAGCAGCTATCAAATCAGCCATTATGACTACTGCTACAACACTAGATAACACGAATCGGCCTATTCGGGACGCATTTGATCGAATAGCAACTCCATTCGAATACGGCGCAGGACATATTCAGCCTAACCTTGCAATGGATCCTGGACTTGTTTATGATTTAAGCACAACTGATTACTTGAACTTTTTATGTGCTTCTGGTTCTACTCAAGCTTTACTCAAGTTGAAATTCTCTTACACTTGTCCTAAGTCCTACAACATTGAAGATCTCAATTATCCTTCAATAACAGTAACTAATCGCGGGATAAATCCTATCAATGTAACTCGTACAGTTACAAACGTTGGGCCTCCAAGTACATATGTTGTGAAAACTCACGTAATTGAAGGATTTAAGGTTCTGGTTCAACCTAGTTCATTGACTTTTAAGACAATTGGAGAAAAGAAGACCTTTCATGTTATTCTGCAAGCAACGGGTGTGCCTAGTTATGGTTTTCCAATATTTGGGAACTTGTCTTGGACAGATGGGAAGCACGGAGTAACCAGTCCTATTGTAGTCCTGTAA 2352 0.4311 MASSIFKVFLSTIILCTFLKEHTHALRKTYIVYLGGHTHGPNPLPSDLESATNSHYDLLASVLGSHEKAKEAVMYSYNKHINGFAALLEEEEASEIAKNPNVVSVFLSKEHKLHTTRSWDFLGLEKYGGIPPNSAWQKAAFGVNTIVANIDTGVWPEHMSFNDYGYGPVPSRWNGNGVCEIDQFNGSNKNFCNRKLIGARIFSKNYEAQFGKLDPLNLTARDFVGHGTHTLSTAAGNFAPGATIFGNGNGTAKGGSPRARVATYKVCWSTLDAGGCHEADILQAFDYAIYDGVDVISASVGGSTPYAEALFTDGISIGAFHAVARNIVVVCSAGNDGPAPRTVLNVAPWSFTVAASTIDRDFLTNISFGNKHYLKGASLNRGLPSRKSYPLIHSVDAKLPNATIQDARICKPGTLDPTKVKGQILICIRGDKTSSVAEGQEAARAGAVGVFVINDEQSGNTLPAEPHIIPGASLDVYQDENADEGEWLRKGGSDKNNSRKLAAFMPAARTYIGIKPAPTVAGFSSRGPSAVQPLILKPDITGPGVNILAAYSLATGPSNLPSDTRRVPFNVQQGTSMSCPHVAGVAGLLKTLHPDWSPAAIKSAIMTTATTLDNTNRPIRDAFDRIATPFEYGAGHIQPNLAMDPGLVYDLSTTDYLNFLCASGSTQALLKLKFSYTCPKSYNIEDLNYPSITVTNRGINPINVTRTVTNVGPPSTYVVKTHVIEGFKVLVQPSSLTFKTIGEKKTFHVILQATGVPSYGFPIFGNLSWTDGKHGVTSPIVVL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3807g00003 783 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Gabi3807g00003 783 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Gabi3807g00003 783 PRINTS Subtilisin serine protease family (S8) signature 573 589 IPR015500 -
Gabi3807g00003 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 114 IPR037045 -
Gabi3807g00003 783 FunFam Subtilisin-like protease SBT1.5 144 370 - -
Gabi3807g00003 783 Gene3D - 660 783 - -
Gabi3807g00003 783 FunFam Subtilisin-like protease SBT5.3 19 114 - -
Gabi3807g00003 783 Gene3D - 359 512 - -
Gabi3807g00003 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 782 IPR045051 -
Gabi3807g00003 783 CDD Peptidases_S8_3 111 610 IPR034197 -
Gabi3807g00003 783 ProSiteProfiles Serine proteases, subtilase domain profile. 118 643 - -
Gabi3807g00003 783 Pfam PA domain 410 474 IPR003137 -
Gabi3807g00003 783 Gene3D Peptidase S8/S53 domain 145 656 IPR036852 GO:0004252|GO:0006508
Gabi3807g00003 783 Pfam Subtilase family 144 615 IPR000209 GO:0006508|GO:0008236
Gabi3807g00003 783 Pfam Fibronectin type-III domain 686 782 IPR041469 -
Gabi3807g00003 783 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Gabi3807g00003 783 SUPERFAMILY Subtilisin-like 113 647 IPR036852 GO:0004252|GO:0006508
Gabi3807g00003 783 CDD PA_subtilisin_like 365 475 - -
Gabi3807g00003 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 574 584 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3807g00003 Gabi-Chr3807 54288 58963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3807g00003 29 782 Subtilisin-like Serine Gene Family AT2G04160 51.774 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3807g00003 - - gmx:100794135 1281.93