Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3805g00004 ATGGATGGTGTCACTGTCAAGGCCGAGGTTGCAGAAGAAGAACACAAAGACCAGGTTTTGGGTCTAGAATATTCTCCTCCTGCTTTGGAGGATCATGGTGATAGTGCTGATGGAGTTACTACCAACAAGTCAGTGCCAGTATCTGGACTGAATGCAGTGATTCTTAGTACAAGTCAGCTTACCATCTTCTATAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCAGAAAAGGTGCATGAAATAATACTTATGGCTGCTGCTGCTGCCAAGTCTACTGAAATGAAGAAGATTGGGACACAATCTTCCCTCATTTCACCCGTTCCCACTAGGCCTTCTTCTCCAAATGGAACCACCAATAATATTGCTTCACCGCAGGCACCCTGCTTTCCTGCAGAGAAGAGTTCCATTTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACATTCACTTCAAAGGTTTCTTGAGAAGCGGCGAGACAGGTTGGGGAGCAAAGCTCCTTATCCTTCCTCATCAACTACAAAAGTGGCTGACAACATAGAGAACAACTTCTGTGGTGACAATGCACCAGATTTGATTTCCTTGAAACGATCCGAGGAGGAATTTCAGCCAACTGTCTCTGCCTCTTGA 630 0.4556 MDGVTVKAEVAEEEHKDQVLGLEYSPPALEDHGDSADGVTTNKSVPVSGLNAVILSTSQLTIFYNGSVCVYDGIPAEKVHEIILMAAAAAKSTEMKKIGTQSSLISPVPTRPSSPNGTTNNIASPQAPCFPAEKSSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPSSSTTKVADNIENNFCGDNAPDLISLKRSEEEFQPTVSAS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3805g00004 209 MobiDBLite consensus disorder prediction 162 182 - -
Gabi3805g00004 209 SMART tify_2 53 88 IPR010399 -
Gabi3805g00004 209 ProSiteProfiles Tify domain profile. 53 88 IPR010399 -
Gabi3805g00004 209 MobiDBLite consensus disorder prediction 101 121 - -
Gabi3805g00004 209 MobiDBLite consensus disorder prediction 166 181 - -
Gabi3805g00004 209 Pfam tify domain 57 87 IPR010399 -
Gabi3805g00004 209 Pfam Jas motif 144 168 IPR018467 -
Gabi3805g00004 209 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 42 177 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3805g00004 Gabi-Chr3805 37803 43574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3805g00004 58 175 Tify Gene Family AT5G20900 52.941 3.02e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi3805g00004 tify 7.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3805g00004 K13464 - gmx:100306045 281.182