Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3804g00002 ATGAAACTTAGCCCCATGTTGATATTAGTTCTTGGAATAGCTTCAGCTACATTTTTAGTGATTGTTGCACTTTATGTGTTCTTTTACTTGAAAAGAGTATCAAAACATGAGAGTAAAGACATAGAAAGCTCAGAAAAGAAGCAGGAAGAGGTAGCTCAGAAGGAGGACTTGATCATCTTTCAAGGTGGGGAGGACCTAACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAATTATGGAACTTTGTATAAGGCTTTGTTGCAGAGGAGCAACAAAGTAAGGCTGCTGAGGTTTCTGAGACCAGTTTGCACTGTAAGAGCTGAAGAATTGGATGAAATGATTCAGTTTCTTGGAAGGATAAGGCATCCCAAGTTGGTTCCTCTTCTGGGATTTTACACTGGGTCAAGGGGTGAGAAGCTTCTTGTTCATCCTTTCTATAGGCATGGGAGTCTGACTCAATTCATAAGAGCAGATGGAAATGGAGAATGTTACAAATGGTCTAACATATGTAGAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACAGGACAAGAGAAGCCTATTATCCATGGAAACCTCAAGTCTAAGAACATCCTTTTGGACCGCTCCTACCAACCATACATCTCAGATTCCGGCCTCCATCTTCTGCTGAATCCGACCGCGGGCCAAGAAATGCTTGAAAGTTCAGCTGCTCAGGGTTATAAGGCACCTGAGCTTATCAAAATGAAGGATGTTAGTGAAGAGAGTGATATATATAGCCTTGGTGTAATCTTGTTGGAATTACTTTCAGGAAAGGAACCTATCAATGAGCATCCAACTCCTGATGAAGATTTCTATTTGCCAAATTTCATGAGAAATGCTGTCCTCGGACACAGAATTTCTGATTTATACCATCCATCCTTTCTTCTCAGAAACGGCAGAGATGATAAAATTCAAGTTACAGAAGAATGCATTCTCAAATTTTTCCAAATTTCTATGGCTTGTTGCTCCCCTTCACCTTCAGTTAGACCTAACATAAAGCAAGTCCTCAGAAAGCTTGAAGAAATTGTACTCTAG 1080 0.4028 MKLSPMLILVLGIASATFLVIVALYVFFYLKRVSKHESKDIESSEKKQEEVAQKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTVRAEELDEMIQFLGRIRHPKLVPLLGFYTGSRGEKLLVHPFYRHGSLTQFIRADGNGECYKWSNICRISIGIAKGLEHLHTGQEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDVSEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPSFLLRNGRDDKIQVTEECILKFFQISMACCSPSPSVRPNIKQVLRKLEEIVL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3804g00002 359 Gene3D Transferase(Phosphotransferase) domain 1 152 359 - -
Gabi3804g00002 359 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 42 357 - -
Gabi3804g00002 359 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3804g00002 359 SUPERFAMILY Protein kinase-like (PK-like) 76 356 IPR011009 -
Gabi3804g00002 359 Gene3D Phosphorylase Kinase; domain 1 32 150 - -
Gabi3804g00002 359 Pfam Protein tyrosine and serine/threonine kinase 77 354 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3804g00002 Gabi-Chr3804 11658 14734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3804g00002 40 357 Carbohydrate Esterase AT5G61570 61.963 1.06e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3804g00002 PK_Tyr_Ser-Thr 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3804g00002 - - gmx:100802295 639.417