Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3804g00001 ATGAAACTTAGCCCCATGTTGATATTAGTTCTTGGAATAGCTTCAGCTACATTTTTAGTGATTGTTGCACTTTATGTGTTCTTTTACTTGAAAAGAGTATCAAAACATGAGAGTAAAGACATAGAAAGCTCAGAAAAGAAGCAGGAAGAGGTAGCTCAGAAGGAGGACTTGATCATCTTTCAAGGTGGGGAGGACCTAACAATATGTGACATATTGGATGCTCCAGGGGAAGTGATTGGAAAATCCAATTATGGAACTTTGTATAAGGCTTTGTTGCAGAGGAGCAACAAAGTAAGGCTGCTGAGGTTTCTGAGACCAGTTTGCACTGTAAGAGCTGAAGAATTGGATGAAATGATTCAGTTTCTTGGAAGGATAAGGCATCCCAAGTTGGTTCCTCTTCTGGGATTTTACACTGGGTCAAGGGGTGAGAAGCTTCTTGTTCATCCTTTCTATAGGCATGGGAGTCTGACTCAATTCATAAGAGATGGAAATGGAGAATGTTACAAATGGTCTAACATATGTAGAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACAGGACAAGAGAAGCCTATTATCCATGGAAACCTCAAGTCTAAGAACATCCTTTTGGACCGCTCCTACCAACCATACATCTCAGATTCCGGCCTCCATCTTCTGCTGAATCCGACCGCGGGCCAAGAAATGCTTGAAAGTTCAGCTGCTCAGGGTTATAAGGCACCTGAGCTTATCAAAATGAAGGATGTTAGTGAAGAGAGTGATATATATAGCCTTGGTGTAATCTTGTTGGAATTACTTTCAGGAAAGGAACCTATCAATGAGCATCCAACTCCTGATGAAGATTTCTATTTGCCAAATTTCATGAGAAATGCTGTCCTCGGACACAGAATTTCTGATTTATACCATCCATCCTTTCTTCTCAGAAACGGCAGAGATGATAAAATTCAAGTTACAGAAGAATGCATTCTCAAATTTTTCCAAATTTCTATGGCTTGTTGCTCCCCTTCACCTTCAGTTAGACCTAACATAAAGCAAGTCCTCAGAAAGCTTGAAGAAATTGTACTCTAG 1077 0.402 MKLSPMLILVLGIASATFLVIVALYVFFYLKRVSKHESKDIESSEKKQEEVAQKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTVRAEELDEMIQFLGRIRHPKLVPLLGFYTGSRGEKLLVHPFYRHGSLTQFIRDGNGECYKWSNICRISIGIAKGLEHLHTGQEKPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDVSEESDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPSFLLRNGRDDKIQVTEECILKFFQISMACCSPSPSVRPNIKQVLRKLEEIVL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3804g00001 358 Gene3D Phosphorylase Kinase; domain 1 32 150 - -
Gabi3804g00001 358 Gene3D Transferase(Phosphotransferase) domain 1 152 358 - -
Gabi3804g00001 358 SUPERFAMILY Protein kinase-like (PK-like) 76 355 IPR011009 -
Gabi3804g00001 358 Pfam Protein tyrosine and serine/threonine kinase 77 353 IPR001245 GO:0004672|GO:0006468
Gabi3804g00001 358 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 42 356 - -
Gabi3804g00001 358 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3804g00001 Gabi-Chr3804 11658 14734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3804g00001 40 356 Carbohydrate Esterase AT5G61570 62.154 5.94e-141 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3804g00001 PK_Tyr_Ser-Thr 2.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3804g00001 - - gmx:100802295 644.039