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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gabi3800g00056
ATGGCAGATGCAGAAACAGAGGTGCAAGGAGTTCCGAAGAAGAGGACGTTCAAGAAGTTCAGTTTCAGAGGGGTGGATCTCGATGCGCTCTTGGACATGTCCACCGATGAACTCGTCAAGCTTTTCTCTGCACGTGCTCGCAGAAGGTTTCAACGCGGTTTGACCCGCAAGCCTATGGCACTAATCAAGAAGCTCCGTAAGAAAAGGGAGGCTCCACCCGGTGAGAAGCCAGAGCCAGTTAGGACTCACCTCCGCAATATGATCATTGTGCCTGAGATGATTGGTAGCATTATTGGTGTTTACAATGGGAAGACCTTCAATCAAGTTGAAATTAAACCAGAAATGATTGGCCACTATCTTGCTGAATTCTCAATCTCTTACAAGCCTGTTAAGCATGGAAGGCCAGGTATAGGTGCTACTCACTCCTCCAGGTTCATCCCTCTCAAATGA
450
0.4778
MADAETEVQGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
149
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gabi3800g00056
149
PIRSF
RPS19p_RPS19a_RPS15e_RPS19o
3
149
IPR002222
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
SUPERFAMILY
Ribosomal protein S19
52
133
IPR023575
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
Gene3D
30s Ribosomal Protein S19; Chain A
7
149
IPR023575
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
FunFam
40S ribosomal protein S15
6
149
-
-
Gabi3800g00056
149
Pfam
Ribosomal protein S19
48
132
IPR002222
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
Hamap
30S ribosomal protein S19 [rpsS].
46
138
IPR002222
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
PRINTS
Ribosomal protein S19 family signature
82
101
IPR002222
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
PRINTS
Ribosomal protein S19 family signature
102
114
IPR002222
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
PRINTS
Ribosomal protein S19 family signature
114
129
IPR002222
GO:0003735|GO:0005840|GO:0006412
Gabi3800g00056
149
ProSitePatterns
Ribosomal protein S19 signature.
102
126
IPR020934
GO:0003723
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gabi3800g00056
Gabi-Chr3800
596048
597974
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gabi3800g00056
1
149
Cytoplasmic Ribosomal Protein Gene Family
AT5G09500
86.667
8.30e-92
261
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gabi3800g00056
K02958
-
mnt:21407300
282.337
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