Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3800g00031 ATGACGACTGGTATAGTACGCGACCAGAACTTGGAAAAACAGATGCAGAAGCAAATGGGGTGCATGTCAGGGTTCCTTCAGATCTTCGATCGCCACCAAATACTCACCGGAAAACGCATCCACTCAGCCAAAAGACTCAGACTCCCTCCCGCATCGGATTCCTCGCCGGAACCGGAGAAACACATTGGATCTCCGGCGATTTCAACGCCTTCTCCGGCGAGAGAGGCCCAACCTGAAGCAAAGGTGACTCTTCCTGTTCTGGAGTTCAAGGAAGGCACGAGGTCTTCGTGGAAGTTCTCCAGAGAGGCTCCCAGACTCTCTCTCGATAGCAGAGCCGTCGTGGATGCCAAAGGAGCACTTCACCCGAGAGAGATCCGAACCAACACGGCAACAGCAACAGCAACGAATCTCGGAGCAGAAAACGACGGAGACAAACAGCGTCGTTCCACAAGCGTTATTGTCAGGCTTATGGGCCTGGACACACTACCGGATTCGGATCCTGACCCGGTTGCGAAGCTCCGAAGATCCGCGTCCGAGTCGGAGTCCAGGGTCCCCAGAGATCTGCCACAGTGTCGGTTCTTCGACTCTAACAACTTTCAGTTGAAGCAGTTACAGGCGAAAACAAAAACCCAGGCTAGTAATGTAGCGCGTGAGAATAATGCTGGCACTTTCAATAATCGGTTGTCCAATGACAGAGCCATGGATCAAACAGAAGCAACCAGAGCTTCCCTTCCTTTGAGGCAGAGAGGAATAATAGCACAAAAGAAGAAGAGTTTCTATGACTCTGCTGATTTCTTCCCCGAGCCGAAGCACACCGTTTCAATGTACGGAGAGATTGAGAGGAGGTTGAGGATACGAGGGATTCAAGAGCCTCCCAAGGATCCTCACACTCTCAAGCATATCTTGGAGGCTCTGCAGCTTAAGGGTCTGTTACATTCCAACCAATCTCCCATTGTTATCATGAAGCCGGTTAGATCTTCCGGTTCGTTGAACCGAACCGGGAATAATTATTCTTCACCTCCTCCCTCCAGCCTCCGGTCCAGTCCTCGCGCTCGCCGGAGCCCGAGCCTTGCCAGTGAGACTGATCGAAGTATTAGAACTCAAACCAGAGGCAGAAACTCGAGGAAGGTTCAAAACACGGAGACTCAGAGGAAAGTGAACAGTGACGGTGTTGATTCGAGAAGGGTGTCTCCGGTTCATTCCCCAAAGATAAGCTCGAGAGGGAATGCAGCGGTTCAGCAAGTGACGAATGGATCGCCCAGGGCGAGAAAAGCGATTGATCGTAAAGAGGTGAAGGAGAAAGTTAAGATGTTGAATGGAGCAGAGGATGAATCTTCCACCATTTCAGAGAATAGCTTCAGCACCTCTTCACATACCGATACAGAGAGATACAAGCCGGAAGAGTACAAGGAAGGGAGGAATCTGCTTGATAGGTGTGATAAGTTGCTTAACAGCATTGCGGAAATAACAGCAGGGAACGAGTTGCAACAACCGAGTCCTGTATCGGTACTTGACTCATCATTTTACAAGGACGATTGGTGTTCACCTTCCCCAATAACCAAACGGTGCATTGATTACAAAGATCAAGGGGCGGAGTCAGAAGATGATACGTGGAGTGCAGCTTTGTGTAGCAGTGAAGGCAAATCCGAGGAGGCAGCATCGGAGGATTGTGATTTCGTTTACGTGTCGGAGATCCTGCGTGCATGTAGTTACTTGCCGGAAGACAGCGACGTTTTCTTGTTGCTGGAGAAGCACCAGTGTCTGAAGGGGATGGACACCTCAGAACCTTCGAGGCTGAAGAGGCGGTTGATTTTCGACACCCTCCAGGAGATCCTGAACCGGAACCAACAGTTACCGCCGTGGAAGGTGGTGTCATGCGGCGAGCAGACGCAGCACGTGTGGTCGGAGTTTCGGAGGATCCGAGAGAGGGAGGAATCGGAATCGGAATCGGAGGACTTGTTTAAGGTGATATGTGGCGTGTTGAGGAAGGACATGGCGGAAGAGATGAGTGGTTGGGGTGAATGGACAATGGAGATGGGTGATGTCGTTTTGGACATCGAACGCCTCGTGTTCAAAGATCTCATTGGTGAAACCATTCGAGAACTCGCCTCATGTGCCCCTAAATGTAACACATTATCCGTTCCTCGTAGGAAGCTGCTCTTTTGA 2166 0.5078 MTTGIVRDQNLEKQMQKQMGCMSGFLQIFDRHQILTGKRIHSAKRLRLPPASDSSPEPEKHIGSPAISTPSPAREAQPEAKVTLPVLEFKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTATATATNLGAENDGDKQRRSTSVIVRLMGLDTLPDSDPDPVAKLRRSASESESRVPRDLPQCRFFDSNNFQLKQLQAKTKTQASNVARENNAGTFNNRLSNDRAMDQTEATRASLPLRQRGIIAQKKKSFYDSADFFPEPKHTVSMYGEIERRLRIRGIQEPPKDPHTLKHILEALQLKGLLHSNQSPIVIMKPVRSSGSLNRTGNNYSSPPPSSLRSSPRARRSPSLASETDRSIRTQTRGRNSRKVQNTETQRKVNSDGVDSRRVSPVHSPKISSRGNAAVQQVTNGSPRARKAIDRKEVKEKVKMLNGAEDESSTISENSFSTSSHTDTERYKPEEYKEGRNLLDRCDKLLNSIAEITAGNELQQPSPVSVLDSSFYKDDWCSPSPITKRCIDYKDQGAESEDDTWSAALCSSEGKSEEAASEDCDFVYVSEILRACSYLPEDSDVFLLLEKHQCLKGMDTSEPSRLKRRLIFDTLQEILNRNQQLPPWKVVSCGEQTQHVWSEFRRIREREESESESEDLFKVICGVLRKDMAEEMSGWGEWTMEMGDVVLDIERLVFKDLIGETIRELASCAPKCNTLSVPRRKLLF 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 437 468 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 399 420 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 325 425 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 442 459 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 371 386 - -
Gabi3800g00031 721 Pfam Domain of unknown function (DUF4378) 558 697 IPR025486 -
Gabi3800g00031 721 PANTHER LONGIFOLIA PROTEIN 3 60 IPR033334 GO:0051513
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 159 189 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 167 188 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 325 364 - -
Gabi3800g00031 721 MobiDBLite consensus disorder prediction 40 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3800g00031 Gabi-Chr3800 289894 292675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3800g00031 97 721 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 36.884 7.52e-94 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3800g00031 - - gmx:100777397 833.172