Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3795g00001 ATGCCACAAAACTGCATAGCACCTAAACCAGAATACAGCAATAGTATCCCTGTGGAAGAGCCACCAGAGATGACCGAGCCCCATAACTCAATTATCCTTTCCTACCCCATTCAAATCAATGAACAATCTTTACCAAAACTCACTATGTACCCAATAACTTTGAAGTTTGAGGAATTGACATACAAAGTTAAACTAGAGCATAAAGGTCTATGTTGGGGCAGCACATGGAGTTCAACAGAGAAGGCCATATTGAAAGGGGTTACAGGTATGGTTTTCCCAGGAGAAATATTGGCTATGCTGGGACCATCTGGTAGTGGAAAAACCACACTTCTTACAGCTCTTGGAGGACGTCTTGGTGGTAAATTATCAGGAAAAATCACATACAATAATCAACCTTTTTCAGGCTCCATAAAAAGAAGAACAGGTTTTGTGACCCAGGATGATGTGCTATACCCTCATCTCACTGTAACAGAAACTCTAGTCTTCACTGCACTTCTAAGGCTACCCAACAGCTTGACAAGGGATGAGAAAGTTCAGCATGTAGAACATGTTATCAATGAGCTAGGACTAACTAGGTGCAGGAGTAGCATGATTGGAGGACCACTTTTCAGAGGAATATCAGGTGGGGAGAAAAAGAGAGTGAGTATAGGCCAGGAAATGCTCATCAATCCAAGCCTGTTGCTGCTAGATGAACCCACTTCAGGTTTGGACTCTACAACAGCACAAAGGATCATAAACACAATTAAAAGCTTGGCTAGTGGGGGTAGAACTGTTGTCACCACCATTCATCAACCCTCTAGTCGCCTTTACCACGTGTTTGATAAGGTGGTCTTGCTCTCTGAAGGGTACCCCATTTATTATGGCTCTGCTTCAACTGCCATGGAGTACTTTTCATCACTTGGTTTTTCCACATCCATGACTGTCAATCCAGCTGATTTTTTGCTTGATCTTGCCAATGGGATTGCCCAGGAAAACATGCATGCAACTGAACAAAGTGAGAACCAGGAACAAGAAAGGAAGCTGGTGAGAGAAGCTCTCATCTCTGCTTATGACATGAACATAGCTACAAAGCTGAAAGCTGAACTTTGCAGCTTGGAGGTGAACAACCACAACACCACGAAAGATGCTACAGCAAAAAATCACATAAAACCGGAGCAATGGTGCACAAGTTGGTGGCATCAATTCAAAGTATTGTTGCAGAGGGGCCTGAGGGAGCGAAGGTATGAAGCCTTCAACAGGCTAAGAATATTCCAAGTTGTAAGTGTCTCTTTCCTTGGTGGACTGCTGTGGTGGCGCACACCAGAATCACACATTGAAGACAGGATCGCCCTGCTATTTTTCTTCTCTGTTTTCTGGGGATTCTACCCCCTCTACAATGCTGTTTTCACATTTCCTCAAGAGAGAAGAATGCTAATCAAGGAACGGTCATCAGGAATGTACAAGCTTTCTTCCTATTTTCTAGCTAGAACAATAGGAGACTTGCCACTAGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTCACCCTATGACATTTGCACTTACCCTTCTTGTGGTTCTTTATAGTGTCCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGGTTAAACAAGCAACTACTTTAGCTTCTGTGACAACGCTTGTATTTCTCATTGCTGGAGGATACTATATACAACAGATTCCTCCCTTCATAGAGTGGCTCAAGTACTTAAGCTATAGTTACTACTGTTACAAGCTTCTTCTTGGTGTGCAATACAGTGATGATGATAAGTATGAGTGCTCAAAAGGGGTGTTGTGCAAGGTTGAAGATTTTCCTCCAATAAAATCAATGGGTTTCAATCATCTGTGGATTGATGTGTCTATTATGGCAATTATGTTGGTGGGTTATCGATTAATTGCTTATTTAGCACTACAGAGAGTGAGGTAG 1968 0.4243 MPQNCIAPKPEYSNSIPVEEPPEMTEPHNSIILSYPIQINEQSLPKLTMYPITLKFEELTYKVKLEHKGLCWGSTWSSTEKAILKGVTGMVFPGEILAMLGPSGSGKTTLLTALGGRLGGKLSGKITYNNQPFSGSIKRRTGFVTQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVEHVINELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIINTIKSLASGGRTVVTTIHQPSSRLYHVFDKVVLLSEGYPIYYGSASTAMEYFSSLGFSTSMTVNPADFLLDLANGIAQENMHATEQSENQEQERKLVREALISAYDMNIATKLKAELCSLEVNNHNTTKDATAKNHIKPEQWCTSWWHQFKVLLQRGLRERRYEAFNRLRIFQVVSVSFLGGLLWWRTPESHIEDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYKLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPHPMTFALTLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLLGVQYSDDDKYECSKGVLCKVEDFPPIKSMGFNHLWIDVSIMAIMLVGYRLIAYLALQRVR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3795g00001 655 SMART AAA_5 93 284 IPR003593 GO:0016887
Gabi3795g00001 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 300 IPR027417 -
Gabi3795g00001 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 54 306 IPR003439 GO:0005524
Gabi3795g00001 655 FunFam ABC transporter G family member 22 71 300 - -
Gabi3795g00001 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 648 - -
Gabi3795g00001 655 MobiDBLite consensus disorder prediction 1 22 - -
Gabi3795g00001 655 Pfam ABC-2 type transporter 394 599 IPR013525 GO:0016020|GO:0140359
Gabi3795g00001 655 Gene3D - 71 300 IPR027417 -
Gabi3795g00001 655 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524|GO:0016887
Gabi3795g00001 655 Pfam ABC transporter 84 234 IPR003439 GO:0005524
Gabi3795g00001 655 CDD ABCG_EPDR 51 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3795g00001 Gabi-Chr3795 15340 18698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3795g00001 45 291 Calmodulin-binding Proteins AT2G36910 24.409 5.00e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3795g00001 K05681 - gmx:100794774 1100.5