Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3793g00003 ATGGTGGACATGACTGGATCCAACAAGTGGATAGCAAAGATGGAGCCAGGTGCTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGCCGCGAGCCCAGAGGTTGTGGGCTGAGAATTACGACAGGATCAGGGAGCTTCATAATATCCAGAATTTAAATCAACATGTTTTCAACACTCCTGCAAGGTCTGATGATGATGAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAACGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGACGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATTTCAAAAGGATGTAG 525 0.4914 MVDMTGSNKWIAKMEPGAHITVVSLPTGGNDLKRIRFCRDMFDKPRAQRLWAENYDRIRELHNIQNLNQHVFNTPARSDDDEIKDLALKLSGKKIKGGTSESINASSTPALDYTNPNQSPIGNTTPGRRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPTGGNDFKRM 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3793g00003 174 PANTHER PROTEIN BREVIS RADIX-LIKE 1 103 174 IPR044532 -
Gabi3793g00003 174 MobiDBLite consensus disorder prediction 97 131 - -
Gabi3793g00003 174 ProSiteProfiles BRX domain profile. 8 63 IPR013591 -
Gabi3793g00003 174 Pfam Transcription factor regulating root and shoot growth via Pin3 8 62 IPR013591 -
Gabi3793g00003 174 Pfam Transcription factor regulating root and shoot growth via Pin3 147 173 IPR013591 -
Gabi3793g00003 174 MobiDBLite consensus disorder prediction 96 137 - -
Gabi3793g00003 174 ProSiteProfiles BRX domain profile. 147 174 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3793g00003 Gabi-Chr3793 60316 62151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3793g00003 9 59 Major Intrinsic Protein MIP AT1G31880 39.216 3.89e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3793g00003 - - lbb:132609654 140.198