Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3793g00002 ATGGAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCATCTCCGAGAGAATCAAGTATGACACCGTTTCTGAAGGGGGGGTTCCACACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTGCGACATGATCAGGGTGCTTCTTAATATACGGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTGATGATAATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACATGGATTCGACTCCGGGGAGTTTCCATGCACCCGCTGGGAATATGGGGTATTTCCTTGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCCGGGAGTGTCAATCATTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGCTGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTCATGCTAAGTATATGTGAAGCCTTGTTGCTGTGA 813 0.4957 MEIKDLALKLSGKKIKGGISERIKYDTVSEGGVPHGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPTGGNDLKRIRFCRDMFDKSRAQRWWAENCDMIRVLLNIRTLNQRVFITPARSDDNENSGESEQDIPMASMLNMDSTPGSFHAPAGNMGYFLGGISRANNPTDNDMDAEWVEQDDPGVSIIVKRSANGTRQIRRIKFSREIFDAAAAKDWWLRNRVRVMLSICEALLL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3793g00002 270 PANTHER PROTEIN BREVIS RADIX-LIKE 1 2 260 IPR044532 -
Gabi3793g00002 270 ProSiteProfiles BRX domain profile. 85 140 IPR013591 -
Gabi3793g00002 270 MobiDBLite consensus disorder prediction 45 69 - -
Gabi3793g00002 270 Pfam Transcription factor regulating root and shoot growth via Pin3 210 261 IPR013591 -
Gabi3793g00002 270 Pfam Transcription factor regulating root and shoot growth via Pin3 85 135 IPR013591 -
Gabi3793g00002 270 ProSiteProfiles BRX domain profile. 210 265 IPR013591 -
Gabi3793g00002 270 MobiDBLite consensus disorder prediction 36 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3793g00002 Gabi-Chr3793 53567 56159 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3793g00002 1 261 Major Intrinsic Protein MIP AT1G31880 41.503 1.04e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3793g00002 - - jre:109014251 213.772