Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3793g00001 ATGTTGTTGTCATCCACTTGCATGTATTCTCTACCAAGTACATTCTCCACTAGCCCAGCTGTAAAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGCTGGCAACCCCAAGAGCATCAAGTATGACACCGTTTCTGAAGAGGTTCCATACGGCTACATTGCTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAAATGGTAACATCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGATGGTGGACATGACTGGATCCAACAAGTGGATAGTAAAGATGGAGCCAGGTGCTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAGGCATTCGCTTCAGCCGAGACATGTTTGATAAGCCGCGAGCCCAGAGGTTGTGGGCTGAGAATTACGACAAGATCAGGGAGCTTCATAATATCCAGAATTTAAATCAACATGTTTTCAACCATCCTGCAAGGTCTGATGATGATGAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAACGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCACCAATTGGTAACACCATCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATACAACGAGTGGATAGCACAGATGGAGCCAGGTGTACACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCGTTCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTGCGACATGATCATGGAGCTTCTTAATATACAGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTGATGATAATGAGAACTCGGGGAATCTGAACAAGATATCCTAA 981 0.4771 MLLSSTCMYSLPSTFSTSPAVKIKDLALKLSGKKIKAGNPKSIKYDTVSEEVPYGYIAGGSASSTPALDYTNPNQSPNGNITPGGRQPQPPAGSVAMVDMTGSNKWIVKMEPGAHITVVSLPTGGNDLKGIRFSRDMFDKPRAQRLWAENYDKIRELHNIQNLNQHVFNHPARSDDDEIKDLALKLSGKKIKGGTSESINASSTPALDYTNPNQSPIGNTIPGGRQPQPPAGSVALVDMTGYNEWIAQMEPGVHITVVSLPTGGNDLKRIRFVRDMFDKSRAQRWWAENCDMIMELLNIQTLNQRVFITPARSDDNENSGNLNKIS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3793g00001 326 MobiDBLite consensus disorder prediction 193 231 - -
Gabi3793g00001 326 MobiDBLite consensus disorder prediction 193 222 - -
Gabi3793g00001 326 ProSiteProfiles BRX domain profile. 243 298 IPR013591 -
Gabi3793g00001 326 PANTHER PROTEIN BREVIS RADIX-LIKE 1 21 206 IPR044532 -
Gabi3793g00001 326 ProSiteProfiles BRX domain profile. 104 159 IPR013591 -
Gabi3793g00001 326 Pfam Transcription factor regulating root and shoot growth via Pin3 243 295 IPR013591 -
Gabi3793g00001 326 Pfam Transcription factor regulating root and shoot growth via Pin3 104 158 IPR013591 -
Gabi3793g00001 326 MobiDBLite consensus disorder prediction 65 87 - -
Gabi3793g00001 326 MobiDBLite consensus disorder prediction 65 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3793g00001 Gabi-Chr3793 2778 5567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3793g00001 178 315 Major Intrinsic Protein MIP AT1G31880 45.402 2.17e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3793g00001 - - lbb:132609654 194.512