Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3792g00049 ATGAACGATCAAACCATTCAAATCCAAATGCTCGCTGAAAAATTCCACCGCTTCGTTCTTGACTGCGATCTGAAGCCACCGTCAACCGCTAACTGCTCAGATAATATATCAAAGCAAGTGAACGAGAACTCTGATTCCATGGATGAAAACAGTTTGTCTAACGGAGTACATGAAGTTTCTACGGATCAGGGTCATACGCTTCCGATATTGAAGAAAATATTTGATCTGAGTACCAAAATTCAGGATTTGAAGCAGCAGCATGTAACCTTAAGTGATCAAGTGAAACTTACAACTGAATCCTTTCCGGGCCTTGATGTTTTGAAGTCTGTTGAGCTTCTTGGTGCTGAATATGAACTCTTGAAAAGAAAGTACCTTGAAGAGTCCTCTGAGCGTAGGCGGCTTTACAATGAAGTGGTTGAACTCAAGGGAAACATCAGAGTTTTCTGCAGATGCAGACCATTAAATGAGAGTGAAATTGCAAACGGGTCTGTATCTGTTGTCAATTTTGAGTCTTCTTCTGATAATGAGCTTCAAGTCATTGGCTCAGATTCTTCCAAGAAGCAATTTAAATTTGATCACGTATTTAGGCCCGAAGATAACCAAGAGGCGGTTTTTTCACAAACTAAGCCTATTGTTACATCAGTATTGGATGGCTTTAATGTCTGCATATTTGCCTATGGGCAAACTGGAACTGGTAAAACATTTACAATGGAGGGAACACCAGAACACAGGGGAGTTAACTACAGAACCTTGGAGGAATTGTTTCGGATAACTGAGGAGAGACATGGAGTAATGAAGTATGAATTGCGAGTTAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGTTGAAAATTCTACCCAACCTACTAAGAAATTGGAGATAAAGCAAACGGCAGAAGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCTCGTGTTTATGGAACTGAAGATGTGTGGGAAATGCTTAAGACTGGAAACCGAGTAAGATCTGTTGGATCCACCTGTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACCGTTATGGGGGAGAATTTAATCAATGGTCTGAAAACTAAGAGTCATCTTTGGCTTGTAGACTTGGCTGGAAGTGAGCGAGTGGGAAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCACTCGGTGATGTTATTTCTGCCCTTGCTTCCAAATCAGCCCATGTCCCTTACAGGAACTCGAAACTCACTCATTTACTGCAGAGCTCTTTGGGAGGAGATTGCAAAACGTTAATGTTTGTCCAGGTTAGTCCAAGCGCAGCAGACTTGGGAGAGACACTTTGTTCCCTGAATTTTGCCACCCGTGTCCGCGGAATCGAGAGTGGCCCAGCTCGCAAGCAAGTAGAACTCACCGAGCTGTTTAAGTACAAGCAAATGGCAGAAAAGCTCAAACATGACGAGAAGGAAACTAAGAAATTACAGGATAACTTGCAAACCTTGCAACTCAGACTCGCTGCAAGAGAACACCATTGTAGAAACCTTCAGGAAAAGGTCCGGGACCTTGAGAACCAGATAGCAGAAGAAAGAAAAACCAGACTAAAACAAGAAAGCAGATCAATTGCTGCTGTTTCAGCTCAACCTTCATCATCAAAACACACAGCAGCTCATAAGAAGCCACCACTGAATCCAACGAAACTGAGACTCCCACTGAGAAGAATAACTAATTTCTTGCCTCCACCATCTTCTCTAACATCAAAGAGATATACCACTTCCATGAATGGAAAGGAAAACTCTGCCAGAAGGACCTCAATGACAACAATTACAGAAGGCTTTGCAAAACCAAGAAGCAGGGTATCCATAGCCATGAGACCACCTGCACAATCAACAACACAGCTCCTTCAGCCAAGGAGGAGGGTCTCCATTGCTACTCTCCGTCCTGACACAATTTCTGACCTGACAACTCCACTCCGTACCTCAGCCTCTCGAATTACCGGTCGGCAATCACCTCAATCACTAATAAGGAGCCAAAGGAAATCTCGGTATTCAAGTTTGTTCGCACCATTGCCAGAGTTGAGAACATCAATTGAGACAACACCAATGTCTGTCAGGAGCAGCAGCAAGTTTATGGGAAGTCCAGTAGCGGCACAGGCAGATTCGCGAGTGGGGGGTAGGCATCCAACAGTTCTTGCACTACAACGGAAACCTTTAGTATGGAGTCCTCTCAAGCTCAGAGCCTTGAGAACTAATCGAAAGTCATCATCATTCTTGCCATCTCGGCCTAACTCCGAAATGCAATAA 2325 0.4353 MNDQTIQIQMLAEKFHRFVLDCDLKPPSTANCSDNISKQVNENSDSMDENSLSNGVHEVSTDQGHTLPILKKIFDLSTKIQDLKQQHVTLSDQVKLTTESFPGLDVLKSVELLGAEYELLKRKYLEESSERRRLYNEVVELKGNIRVFCRCRPLNESEIANGSVSVVNFESSSDNELQVIGSDSSKKQFKFDHVFRPEDNQEAVFSQTKPIVTSVLDGFNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITEERHGVMKYELRVSMLEVYNEKIRDLLVENSTQPTKKLEIKQTAEGTQEVPGLVEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGLKTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHVPYRNSKLTHLLQSSLGGDCKTLMFVQVSPSAADLGETLCSLNFATRVRGIESGPARKQVELTELFKYKQMAEKLKHDEKETKKLQDNLQTLQLRLAAREHHCRNLQEKVRDLENQIAEERKTRLKQESRSIAAVSAQPSSSKHTAAHKKPPLNPTKLRLPLRRITNFLPPPSSLTSKRYTTSMNGKENSARRTSMTTITEGFAKPRSRVSIAMRPPAQSTTQLLQPRRRVSIATLRPDTISDLTTPLRTSASRITGRQSPQSLIRSQRKSRYSSLFAPLPELRTSIETTPMSVRSSSKFMGSPVAAQADSRVGGRHPTVLALQRKPLVWSPLKLRALRTNRKSSSFLPSRPNSEMQ 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3792g00049 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 504 IPR027417 -
Gabi3792g00049 774 ProSiteProfiles Kinesin motor domain profile. 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3792g00049 774 Pfam Kinesin motor domain 150 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3792g00049 774 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3792g00049 774 CDD KISc_C_terminal 142 469 - -
Gabi3792g00049 774 MobiDBLite consensus disorder prediction 546 564 - -
Gabi3792g00049 774 Gene3D Kinesin motor domain 139 511 IPR036961 -
Gabi3792g00049 774 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3792g00049 774 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3792g00049 774 PRINTS Kinesin heavy chain signature 338 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3792g00049 774 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3792g00049 774 PANTHER KINESIN-LIKE PROTEIN KLP-3 7 607 IPR027640 GO:0003777|GO:0007018
Gabi3792g00049 774 Coils Coil 485 547 - -
Gabi3792g00049 774 MobiDBLite consensus disorder prediction 541 613 - -
Gabi3792g00049 774 FunFam Kinesin-like protein 139 508 - -
Gabi3792g00049 774 MobiDBLite consensus disorder prediction 586 613 - -
Gabi3792g00049 774 SMART kinesin_4 142 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3792g00049 Gabi-Chr3792 517618 521541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3792g00049 110 493 Calmodulin-binding Proteins AT5G65930 41.266 1.35e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3792g00049 K10406 - gmx:100788477 1255.74