Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3792g00040 ATGTATTTTATGTCAGCTGAAAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATAAGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAATTTTCACTTCCCTCATAAGATCCAGGCAACTGCCCTCATCTATTTTAAAAGGTTCTACTTGCAATGGTCGGTGATGGAACATCAACCAAAAAATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTATCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTTTATGCACCATATCGCTCTGTTGAAGGTTTTATAAATGATATGGAGGAATTTTGTAATGCTGGTGATGACCAGCTTCAAATGCTCAAGAATTTGCAAGATACAGCAAGATTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCTTTGGCGGCTTTGCGTAACTCAAATGCATTCCATAAAGTTCTTGACTTTGATAGTTACCTGAGCAGCATTTTTTCCCGTCAGAATTCCATGCATACAATGTCCGAGCTTTTTGAATCACTGAATGAAATTGATTCTTGGGTTAGAAAATACAAAGTTCCTTCAGAGAAGGAATTGAAGCATATCAACAGGAAACTGAAGTCTTGTTGGGGTCTTAGCTCCCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCTAAAAAGAGCTCAAATGAAGCACAAAATGTGCCATCTCTTGTATAA 834 0.3741 MYFMSAEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFINDMEEFCNAGDDQLQMLKNLQDTARLEVDKMMLTDAPLLFPPGQLALAALRNSNAFHKVLDFDSYLSSIFSRQNSMHTMSELFESLNEIDSWVRKYKVPSEKELKHINRKLKSCWGLSSHDEGKKREKKSKHKSKKSSNEAQNVPSLV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3792g00040 277 SUPERFAMILY Cyclin-like 121 246 IPR036915 -
Gabi3792g00040 277 PANTHER CYCLIN 10 267 IPR043198 GO:0006357|GO:0016538
Gabi3792g00040 277 SMART cyclin_7 29 110 IPR013763 -
Gabi3792g00040 277 MobiDBLite consensus disorder prediction 246 277 - -
Gabi3792g00040 277 SUPERFAMILY Cyclin-like 9 118 IPR036915 -
Gabi3792g00040 277 FunFam Cyclin h 119 224 - -
Gabi3792g00040 277 FunFam cyclin-H1-1 5 117 - -
Gabi3792g00040 277 CDD CYCLIN_AcCycH_rpt2 119 243 - -
Gabi3792g00040 277 Pfam Cyclin C-terminal domain 121 243 IPR031658 -
Gabi3792g00040 277 Gene3D - 4 117 - -
Gabi3792g00040 277 Pfam Cyclin, N-terminal domain 23 116 IPR006671 -
Gabi3792g00040 277 Gene3D - 119 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3792g00040 Gabi-Chr3792 416558 421233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3792g00040 11 222 Core Cell Cycle Gene Families AT5G27620 67.453 7.64e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3792g00040 K06634 - gmx:547736 496.893