Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3792g00019 ATGGGTGGTTGTTCTGAGCTTCTTCCCATGATCATCATCATTACCCTCTTGATGTTCTTATCATCACAAGGAACTCACATTCTGAGCTTCCACGTTCCTGGCCTTAAGGAGATTCATTTCATGGAGGGGAATGAACAAGAAAATGAAAACCAGATTAAGAAAATCTCAGGACTTGATGAGAATGAAGAGAAGCAAGCTTTGATAGTGGAAAAGTTTAGATCTTTGCTTGGACTCAAGAGTTTCCACACCAAAGTTCCACCATCCAATGGAGATTCTGAGTTTCTCTCCCCATCACCTTCTCCATCACCCAACATTGAAGCTGATTCTCCAGCTCCTTCTCCAGTACTGCACGTGCATCCTCATTCCCATCATCCACGACATCACTCTCATTTGAACCCTCCACTTAACAAAACACACCGTGAAGATGAAGGCAAATCTAAAAGAATACTAGTAGCTGTTCTTGTATCTGTAGGAATTGCTACATTATTTGGTGCTTGTGTGTTAATCTTGGTCTGGAGGAAATTCACAAACCACAAAAAGAAACCCAAAAAGACAATGCCACTCTGTAGCAAGGACGAAGGAACTAGAGGTACTTATCAAAGTTCATCAAACAAGGTGAGTTTAAACTCAGGGGGGTTAGATCTGTTTTATCTTAATGCTTTAGGCGATGATATAGAGCAACACCCTTGCACCTTGAAAAAGACTAGTAAGAATGGTTCAGAATATGAGAATGTTAGCAGTTCTTCCACTAAGGAAATTGTATCTGTTCATGAAGATGTGGAATCAGTAAAAAGTGAACCTGAATCTGATGGAGGTAACTCTTCTTCTAGGGATAAAATTATCCCTGAAGATTGCCATTCATCAGATAATGAAAGCTTTCATTCCATCATTGATTCACAATCAAATACCAGACTTTCAAATGCTTCAGCTGAAAGCCTGAGTGACACAATTTCTTTGTCCACTCAAAATTCAAGTTTATTAGCTAACAAAATTCCTAGTTCTCCTCAAATCTCAAAAATACAATCTCAAAAATCACCATATAGTCCAAAACATGAAGAGCAAGAGATTGAGACATCTATCTCCACTTCCCCTCCACCTCCTCCACCACCTCCTCCCCTGCCAATGCCATTGTTTTCTTTGCATTCTCTTACTTCTTCATCTAGAGTTTCCTCTCACTCTCCACTTTCATTGACATCTCATAATTTATCATCTCCTAGAAATTCAGACACTTTCTCAGGATCAAATCAAAGCCCAGAAAAAGAATCGCTTTCTCCACCTCCACCATCTAACCCTACAAAATCTCCTCCAAGCATTCCCCCACCACCATGCCCACCTCCATTTCTAAAAGCCAATATCAACAATGCCAAAACCCCACCTCCTCCACCATCTCTAATCCCTCAATTTACCACACTAGGTAAAGATGGTGCACCTCTGCCAAAACTTAAACCACTTCACTGGGACAAAGTAAGAGCTGCACCAAATCGCACAATGGTTTGGGATAAGCTACGATCAAGCTCATTCGAGTTGGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTACAAAATTCAATTAAGAATGACGAGACAAAGAACAAAACCCCGTCTCCAAGCAAGCATGTACTTGACCCAAAACGGTTGCAGAACATTACAATACTCTCAAAAGCTCTGAATGCGACAGCTGAGCATGTATGCGAAGCCCTAATACAAGGGAAGGGCTTGTCTTTGCAACAACTAGAGGCATTAGCGAAGATGATACCCACCAAGGAAGAAGAAGCTAAGCTTTTCAATTATAAAGGCAACATTAATGAATTGGGGTCCGCAGAAAAGTTTGTGAGGGCAATGCTTGGCGTGCCATTTGCCTTTGAACGAGTAGAAGGCATGCTTTATAGAGAGACTTTTGATGATGAAGTTGTTCACCTCAGGAACTCATTTTCAATGCTTGAGGAAGCATGCAAGGAACTAAGATCAAGCAGGCTCTTCTCGAAATTACTAGAAACAGTGTTAAAAACAGGAAACCGTATGAATGTTGGAACAATCAGAGGAGGTGCTAGAGCATTCAAACTCGATGCCCTTCTCAAACTTGCAGATGTCAAGGGAACTGATGGGAAAACTACCTTACTACATTTTGTTGTTCAAGAGATTGTTCGTTCAGAAGGGATCAAAGTTTCAGATAGCATTATGGGGAAAATAAGCCAGAAAAGTAAGAACAGAACGGAGGAAGAGAAGGAAGAAGATTATAGAAGGATGGGACTAGAACTAGTTTCTGGTCTTAGCACTGAATTATACAATGTAAAGAAGACAGCTACAATTGACTTGGATGTTCTTGCAAACTCTGTGTCAAACCTTTCAGATGGAATGGCTAAGCTACAACATCTAGTAGACAAGGAGTTGCATAAGGATGAAAGATGCATGAACTTTGTAAACTCGATCAAGTGCTTCCTAAACTATGCAGATAGAAACCTGAAGGAGTTGCAAGGGGATGAAGATAGTGTTCTAGCACGTGTGAAAGAGATTACAGAATATTTTCATGGGGATGTGAGCAAAGAAGATGCTAACCCACTTAGAATATTTGTTATAGTGAGAGATTTTCTGGGCATGTTAGATAATGTGTGTAAAGAGCTTAGAAGGTCTAAAGCTACCCGCAGCCCAAACCCTCTTGCTCCTTTCAGATAG 2679 0.4061 MGGCSELLPMIIIITLLMFLSSQGTHILSFHVPGLKEIHFMEGNEQENENQIKKISGLDENEEKQALIVEKFRSLLGLKSFHTKVPPSNGDSEFLSPSPSPSPNIEADSPAPSPVLHVHPHSHHPRHHSHLNPPLNKTHREDEGKSKRILVAVLVSVGIATLFGACVLILVWRKFTNHKKKPKKTMPLCSKDEGTRGTYQSSSNKVSLNSGGLDLFYLNALGDDIEQHPCTLKKTSKNGSEYENVSSSSTKEIVSVHEDVESVKSEPESDGGNSSSRDKIIPEDCHSSDNESFHSIIDSQSNTRLSNASAESLSDTISLSTQNSSLLANKIPSSPQISKIQSQKSPYSPKHEEQEIETSISTSPPPPPPPPPLPMPLFSLHSLTSSSRVSSHSPLSLTSHNLSSPRNSDTFSGSNQSPEKESLSPPPPSNPTKSPPSIPPPPCPPPFLKANINNAKTPPPPPSLIPQFTTLGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQNSIKNDETKNKTPSPSKHVLDPKRLQNITILSKALNATAEHVCEALIQGKGLSLQQLEALAKMIPTKEEEAKLFNYKGNINELGSAEKFVRAMLGVPFAFERVEGMLYRETFDDEVVHLRNSFSMLEEACKELRSSRLFSKLLETVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIKVSDSIMGKISQKSKNRTEEEKEEDYRRMGLELVSGLSTELYNVKKTATIDLDVLANSVSNLSDGMAKLQHLVDKELHKDERCMNFVNSIKCFLNYADRNLKELQGDEDSVLARVKEITEYFHGDVSKEDANPLRIFVIVRDFLGMLDNVCKELRRSKATRSPNPLAPFR 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3792g00019 892 ProSiteProfiles Formin homology-2 (FH2) domain profile. 471 892 IPR015425 -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 379 420 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 86 142 - -
Gabi3792g00019 892 PANTHER FORMIN-RELATED 397 881 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi3792g00019 892 Coils Coil 41 61 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 329 462 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 86 102 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 421 448 - -
Gabi3792g00019 892 Pfam Formin Homology 2 Domain 475 869 IPR015425 -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 254 291 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 232 253 - -
Gabi3792g00019 892 SMART it6_source 471 884 IPR015425 -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 361 377 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 181 205 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 329 345 - -
Gabi3792g00019 892 SUPERFAMILY Formin homology 2 domain (FH2 domain) 484 881 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 119 133 - -
Gabi3792g00019 892 MobiDBLite consensus disorder prediction 232 293 - -
Gabi3792g00019 892 Gene3D Formin, FH2 domain 494 886 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3792g00019 Gabi-Chr3792 223814 226999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3792g00019 44 892 FH2 protein (formin) Gene Family AT3G05470 52.058 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3792g00019 - - gmx:100793761 1177.16