Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3792g00012 ATGGCGGATTCTTCAAGCAACTCAAAGGAGCAGAAGACGCGGGTATACCATCCTTACCAAGATCTCAACGTTCCGATCCAGAAGCTCTACAACCTGCCCACCGCGCCGGAGCACCTCTTCCCGGAAGAAGCCGCCAGGACCCACCGCTCCTGGGGCGAGAACCTCCAGTACTACACTGGCTGTGGCTACCTCTCCGGCGCCATCATCGGCGGCGCCAAGGGGACCTTCCAAGGTCTCAGGGATGCTGAGTCTGGCGACTCGGCGAAGCTCCGGATCAACCGAGTTCTGAACTCGGGGGGTCAGAGTGGTCGCAAGCTTGCGAACTCGCTCGGCGTGCTAGGGTTGATCTTTTCGGGCCTCGAGACCGGGATGATCTACTTCAGGGGCAGGGATGACTTGGTCAACAGCGCTGTCGCCGGACTTGGCACCGGAGCGCTCTACAGGGCGGCGGCGGGGCCGCGATCTGCTGCTATTGCAGGTGCCATCGGCGGAATTGCGGCGGCGGTGGCAGTTTCCGGGAAGCAAGCTTTGAAAAGATATGTTCCGATATAA 552 0.6051 MADSSSNSKEQKTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGENLQYYTGCGYLSGAIIGGAKGTFQGLRDAESGDSAKLRINRVLNSGGQSGRKLANSLGVLGLIFSGLETGMIYFRGRDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAVAVSGKQALKRYVPI 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3792g00012 183 PANTHER TIM23 25 171 IPR045238 GO:0022857
Gabi3792g00012 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3792g00012 Gabi-Chr3792 130407 131183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3792g00012 4 179 Chloroplast and Mitochondria Gene Families AT1G17530 55.056 1.26e-62 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3792g00012 K17794 - gmx:100779163 283.108