Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3792g00002 ATGGATAGGGTCTTCTCTGTCGATGAAATCTCTGACCATTTCTGGTCGCCGCCGATCCCAATCACCGGCTCCTCCCCCATCGATTCGTCGAAGATGAATCGCAGTGCTTCAGAGTGGGCCTTCCAGCGCTTCATCGAGGAAGCTACAGCTTCCGCAACATCTCCCCCTTCTTCTTCTTCCGCAGCTGACGACGTCGTTTTCCTGGAAATGGAAGATCAACGCAAACCCGCGCCCCTACCAAAGAACGGTGCAGATTTGCCTAACGGGCCTCCTCCTCCTCCATCCCTGTCCGTTGATTCGGACGAATACCAGGCTTTCCTCAAGAGCAAGCTCAATCTGGCATGCGCTGCAGTCGCCATGACTAGGGGATCTTTGGTTAGATCTCAAGATCCAGCTACTTTTCCTGACAATGGATCACAGCTGTCTAATCCTGCTCAAGTTGGATCCCAGCCTACCTTTAAAGGATCTGGTCCTTCTGGAAATGACCCACCTAAATTGCTAGATAAAGATACAAAAGCACCAATTGGGATACCTTCCATACCTACCATGCAAAAGAAACCTGCTGTTGCAATCAGGCCATCAACAAGTGGATCATCAAGAGAACAGTCAGATGACGAGGAAGCTGAAGGAGAGACAGATGTGAATGACAACACGGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTATCTGAACTGGAGACACAGGTTAACCAATTAAGAGGTGAAAACTCGTCCTTGTTAAAGCGCCTTACTGATGTAAGCCACAAGTACAAAGAATCTGCTGTCGACAACAGAGTATTAAAAGCTGATGTTGAAACCTTAAGAGCAAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACTGGGTTCAATCCAATGCTTCATGCCATGTCTGAGATATCATCAATTGGCATGCCATCATTTGATGGAAACCATTCAGACACATCAGCTGATGCTGCTGTTCCTGTGCAAGATGACCAACATCATCACTTCTATCAACCCACATCTAACAATCCTATGCCCACCAGTCATGATCTGAGAGTCAACAATGGGCTGGGGGACATTTCTACAATTGAGAATGTGCAGCAGAACACTGCAGGAGTGGTAGGTGGGAACAAGATGGCTCAAACAGCTCCCTTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAACGTATTCGTGGTGGCGTGGATTCATGTGGACCTCCTTCTAATGGAGAGCAGTAA 1284 0.479 MDRVFSVDEISDHFWSPPIPITGSSPIDSSKMNRSASEWAFQRFIEEATASATSPPSSSSAADDVVFLEMEDQRKPAPLPKNGADLPNGPPPPPSLSVDSDEYQAFLKSKLNLACAAVAMTRGSLVRSQDPATFPDNGSQLSNPAQVGSQPTFKGSGPSGNDPPKLLDKDTKAPIGIPSIPTMQKKPAVAIRPSTSGSSREQSDDEEAEGETDVNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLSELETQVNQLRGENSSLLKRLTDVSHKYKESAVDNRVLKADVETLRAKVKMAEETVKRITGFNPMLHAMSEISSIGMPSFDGNHSDTSADAAVPVQDDQHHHFYQPTSNNPMPTSHDLRVNNGLGDISTIENVQQNTAGVVGGNKMAQTAPLQRVASLEHLQKRIRGGVDSCGPPSNGEQ 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3792g00002 427 Pfam Basic leucine-zipper C terminal 291 416 IPR020983 -
Gabi3792g00002 427 Coils Coil 282 302 - -
Gabi3792g00002 427 CDD bZIP_plant_GBF1 225 275 IPR045314 GO:0003700|GO:0006355
Gabi3792g00002 427 PANTHER BASIC LEUCINE ZIPPER 63 1 417 - -
Gabi3792g00002 427 MobiDBLite consensus disorder prediction 126 157 - -
Gabi3792g00002 427 Coils Coil 233 267 - -
Gabi3792g00002 427 SUPERFAMILY Leucine zipper domain 223 273 IPR046347 GO:0003700|GO:0006355
Gabi3792g00002 427 MobiDBLite consensus disorder prediction 217 233 - -
Gabi3792g00002 427 SMART brlzneu 220 284 IPR004827 GO:0003700|GO:0006355
Gabi3792g00002 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 222 277 IPR004827 GO:0003700|GO:0006355
Gabi3792g00002 427 Pfam bZIP transcription factor 223 276 IPR004827 GO:0003700|GO:0006355
Gabi3792g00002 427 MobiDBLite consensus disorder prediction 83 97 - -
Gabi3792g00002 427 MobiDBLite consensus disorder prediction 124 247 - -
Gabi3792g00002 427 FunFam BZIP transcription factor 222 273 - -
Gabi3792g00002 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 227 242 IPR004827 GO:0003700|GO:0006355
Gabi3792g00002 427 MobiDBLite consensus disorder prediction 48 101 - -
Gabi3792g00002 427 Gene3D - 223 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3792g00002 Gabi-Chr3792 6167 12711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3792g00002 1 356 bZIP Transcription Factor Family AT4G02640 40.800 7.82e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3792g00002 bZIP_C 4.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3792g00002 K25784 - gmx:100170702 566.614